hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-22045074/chunk_1/iprscan-20080501-22045074.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0269 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00246 32.1 7.8e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00246 1/1 505 522 .. 1 19 [] 32.1 7.8e-05 Alignments of top-scoring domains: SM00246: domain 1 of 1, from 505 to 522: score 32.1, E = 7.8e-05 *->aRsaLLaqIrgqGkkLKKv<-* aRs LL++Ir +G++L+Kv KIAA0269 505 ARSVLLEAIR-KGIQLRKV 522 //