# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha06802s1.fasta.nr -Q ../query/KIAA0272.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0272, 759 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824577 sequences Expectation_n fit: rho(ln(x))= 6.0643+/-0.000194; mu= 9.8680+/- 0.011 mean_var=106.2987+/-20.266, 0's: 36 Z-trim: 44 B-trim: 0 in 0/67 Lambda= 0.124397 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|68565074|sp|Q92560.2|BAP1_HUMAN RecName: Full=U ( 729) 4825 876.9 0 gi|114587267|ref|XP_001171970.1| PREDICTED: BRCA1 ( 729) 4809 874.0 0 gi|109039220|ref|XP_001089173.1| PREDICTED: simila ( 729) 4762 865.6 0 gi|73985316|ref|XP_541853.2| PREDICTED: similar to ( 729) 4645 844.6 0 gi|149728610|ref|XP_001493524.1| PREDICTED: BRCA1 ( 726) 4603 837.1 0 gi|148692855|gb|EDL24802.1| Brca1 associated prote ( 755) 4594 835.4 0 gi|68565075|sp|Q99PU7.1|BAP1_MOUSE RecName: Full=U ( 728) 4487 816.2 0 gi|148692856|gb|EDL24803.1| Brca1 associated prote ( 768) 4341 790.1 0 gi|149034185|gb|EDL88955.1| Brca1 associated prote ( 740) 4333 788.6 0 gi|114587271|ref|XP_001171939.1| PREDICTED: BRCA1 ( 647) 4234 770.8 0 gi|114587275|ref|XP_516511.2| PREDICTED: BRCA1 ass ( 639) 4162 757.9 2.8e-216 gi|73985322|ref|XP_859529.1| PREDICTED: similar to ( 714) 3903 711.4 2.9e-202 gi|32492935|gb|AAN05092.1| MU-MB-17.261 [Homo sapi ( 566) 3728 679.9 7e-193 gi|73985320|ref|XP_859494.1| PREDICTED: similar to ( 739) 3637 663.7 7.1e-188 gi|194041223|ref|XP_001925271.1| PREDICTED: BRCA1 ( 682) 3282 600.0 1e-168 gi|114587273|ref|XP_001171926.1| PREDICTED: BRCA1 ( 499) 3247 593.6 6.2e-167 gi|114587269|ref|XP_001171956.1| PREDICTED: BRCA1 ( 711) 3193 584.0 6.7e-164 gi|73985318|ref|XP_859457.1| PREDICTED: similar to ( 499) 3079 563.4 7.4e-158 gi|124829183|gb|AAI33318.1| BAP1 protein [Bos taur ( 711) 2984 546.5 1.3e-152 gi|47229700|emb|CAG06896.1| unnamed protein produc ( 754) 2498 459.3 2.5e-126 gi|189535027|ref|XP_687254.3| PREDICTED: similar t ( 755) 2451 450.9 8.5e-124 gi|120537825|gb|AAI29507.1| LOC558885 protein [Dan ( 686) 2431 447.2 9.6e-123 gi|62825902|gb|AAH94108.1| MGC114946 protein [Xeno ( 618) 2082 384.6 6.3e-104 gi|51703436|gb|AAH80985.1| BRCA1 associated protei ( 685) 2073 383.0 2.1e-103 gi|89272870|emb|CAJ81966.1| Novel Ubiquitin carbox ( 685) 2067 381.9 4.4e-103 gi|94732330|emb|CAK11034.1| novel protein similar ( 724) 1950 360.9 9.7e-97 gi|60098835|emb|CAH65248.1| hypothetical protein [ ( 700) 1917 355.0 5.7e-95 gi|210123067|gb|EEA70770.1| hypothetical protein B ( 694) 1379 258.4 6.6e-66 gi|156548157|ref|XP_001606781.1| PREDICTED: simila ( 482) 1253 235.7 3.2e-59 gi|156211680|gb|EDO32776.1| predicted protein [Nem ( 377) 1205 227.0 1e-56 gi|210123082|gb|EEA70785.1| hypothetical protein B ( 635) 1198 225.9 3.7e-56 gi|193580294|ref|XP_001944229.1| PREDICTED: simila ( 505) 1193 224.9 5.8e-56 gi|108883957|gb|EAT48182.1| ubiquitin c-terminal h ( 478) 1181 222.8 2.5e-55 gi|91087099|ref|XP_975054.1| PREDICTED: similar to ( 407) 1163 219.5 2.1e-54 gi|212506907|gb|EEB10984.1| predicted protein [Ped (1130) 1149 217.3 2.5e-53 gi|115918105|ref|XP_793621.2| PREDICTED: similar t ( 815) 1138 215.2 7.8e-53 gi|194143951|gb|EDW60347.1| GJ20906 [Drosophila vi ( 462) 1102 208.6 4.5e-51 gi|193910704|gb|EDW09571.1| GI18963 [Drosophila mo ( 461) 1093 207.0 1.4e-50 gi|190658591|gb|EDV55804.1| GG22294 [Drosophila er ( 471) 1093 207.0 1.4e-50 gi|7302976|gb|AAF58046.1| CG8445, isoform A [Droso ( 471) 1092 206.8 1.6e-50 gi|194193739|gb|EDX07315.1| GD25561 [Drosophila si ( 471) 1090 206.4 2e-50 gi|194126051|gb|EDW48094.1| GM20083 [Drosophila se ( 471) 1087 205.9 2.9e-50 gi|194178362|gb|EDW91973.1| GE14091 [Drosophila ya ( 471) 1086 205.7 3.3e-50 gi|54635715|gb|EAL25118.1| GA21084 [Drosophila pse ( 475) 1077 204.1 1e-49 gi|193899370|gb|EDV98236.1| GH22997 [Drosophila gr ( 462) 1076 203.9 1.1e-49 gi|190620495|gb|EDV36019.1| GF12763 [Drosophila an ( 470) 1076 203.9 1.2e-49 gi|193587380|ref|XP_001943902.1| PREDICTED: simila ( 421) 1069 202.6 2.5e-49 gi|194162150|gb|EDW77051.1| GK22163 [Drosophila wi ( 435) 1066 202.1 3.8e-49 gi|198416231|ref|XP_002126151.1| PREDICTED: simila ( 435) 1065 201.9 4.3e-49 gi|167866434|gb|EDS29817.1| ubiquitin carboxyl-ter ( 470) 1054 200.0 1.8e-48 >>gi|68565074|sp|Q92560.2|BAP1_HUMAN RecName: Full=Ubiqu (729 aa) initn: 4825 init1: 4825 opt: 4825 Z-score: 4681.5 bits: 876.9 E(): 0 Smith-Waterman score: 4825; 100.000% identity (100.000% similar) in 729 aa overlap (31-759:1-729) 10 20 30 40 50 60 KIAA02 GAPGAVGAPGGGSGGEGGPGHGAEGPPRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVE :::::::::::::::::::::::::::::: gi|685 MNKGWLELESDPGLFTLLVEDFGVKGVQVE 10 20 30 70 80 90 100 110 120 KIAA02 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA02 CATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 CATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA02 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI 160 170 180 190 200 210 250 260 270 280 290 300 KIAA02 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL 220 230 240 250 260 270 310 320 330 340 350 360 KIAA02 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA02 KPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 KPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP 340 350 360 370 380 390 430 440 450 460 470 480 KIAA02 PQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 PQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAE 400 410 420 430 440 450 490 500 510 520 530 540 KIAA02 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP 460 470 480 490 500 510 550 560 570 580 590 600 KIAA02 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL 520 530 540 550 560 570 610 620 630 640 650 660 KIAA02 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPK 580 590 600 610 620 630 670 680 690 700 710 720 KIAA02 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN 640 650 660 670 680 690 730 740 750 KIAA02 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ ::::::::::::::::::::::::::::::::::::::: gi|685 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 700 710 720 >>gi|114587267|ref|XP_001171970.1| PREDICTED: BRCA1 asso (729 aa) initn: 4809 init1: 4809 opt: 4809 Z-score: 4666.0 bits: 874.0 E(): 0 Smith-Waterman score: 4809; 99.726% identity (99.863% similar) in 729 aa overlap (31-759:1-729) 10 20 30 40 50 60 KIAA02 GAPGAVGAPGGGSGGEGGPGHGAEGPPRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVE :::::::::::::::::::::::::::::: gi|114 MNKGWLELESDPGLFTLLVEDFGVKGVQVE 10 20 30 70 80 90 100 110 120 KIAA02 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA02 CATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|114 CATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA02 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI 160 170 180 190 200 210 250 260 270 280 290 300 KIAA02 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL 220 230 240 250 260 270 310 320 330 340 350 360 KIAA02 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA02 KPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|114 KPKLVVKPPGSSLNGVPPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP 340 350 360 370 380 390 430 440 450 460 470 480 KIAA02 PQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAE 400 410 420 430 440 450 490 500 510 520 530 540 KIAA02 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP 460 470 480 490 500 510 550 560 570 580 590 600 KIAA02 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL 520 530 540 550 560 570 610 620 630 640 650 660 KIAA02 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPK 580 590 600 610 620 630 670 680 690 700 710 720 KIAA02 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN 640 650 660 670 680 690 730 740 750 KIAA02 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ ::::::::::::::::::::::::::::::::::::::: gi|114 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 700 710 720 >>gi|109039220|ref|XP_001089173.1| PREDICTED: similar to (729 aa) initn: 4762 init1: 4762 opt: 4762 Z-score: 4620.4 bits: 865.6 E(): 0 Smith-Waterman score: 4762; 98.628% identity (99.588% similar) in 729 aa overlap (31-759:1-729) 10 20 30 40 50 60 KIAA02 GAPGAVGAPGGGSGGEGGPGHGAEGPPRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVE :::::::::::::::::::::::::::::: gi|109 MNKGWLELESDPGLFTLLVEDFGVKGVQVE 10 20 30 70 80 90 100 110 120 KIAA02 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA02 CATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|109 CATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA02 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI 160 170 180 190 200 210 250 260 270 280 290 300 KIAA02 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL 220 230 240 250 260 270 310 320 330 340 350 360 KIAA02 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPN ::::::::::::::::::::::::::::::::::.::.::::::::::::.::::::::. gi|109 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAATEGTHTDGAEEAAGSCTQAPSHSPPS 280 290 300 310 320 330 370 380 390 400 410 420 KIAA02 KPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|109 KPKLVVKPPGSSLNGVPPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP 340 350 360 370 380 390 430 440 450 460 470 480 KIAA02 PQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAE :::::::::::::::::::::::::.::: :::::::::::::::::::::::::::::: gi|109 PQQYSDDEDDYEDDEEDDVQNTNSAIRYKRKGTGKPGALSGSADGQLSVLQPNTINVLAE 400 410 420 430 440 450 490 500 510 520 530 540 KIAA02 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP 460 470 480 490 500 510 550 560 570 580 590 600 KIAA02 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL 520 530 540 550 560 570 610 620 630 640 650 660 KIAA02 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPK ::::::::::::::::::::::::::::::::::::::::::::.:::::: :::::::: gi|109 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGLVRPGEPSSGEKYSPK 580 590 600 610 620 630 670 680 690 700 710 720 KIAA02 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN 640 650 660 670 680 690 730 740 750 KIAA02 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ ::::::::::::::::::::::::::::::::::::::: gi|109 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 700 710 720 >>gi|73985316|ref|XP_541853.2| PREDICTED: similar to BRC (729 aa) initn: 4645 init1: 4645 opt: 4645 Z-score: 4506.9 bits: 844.6 E(): 0 Smith-Waterman score: 4645; 96.022% identity (98.354% similar) in 729 aa overlap (31-759:1-729) 10 20 30 40 50 60 KIAA02 GAPGAVGAPGGGSGGEGGPGHGAEGPPRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVE :::::::::::::::::::::::::::::: gi|739 MNKGWLELESDPGLFTLLVEDFGVKGVQVE 10 20 30 70 80 90 100 110 120 KIAA02 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA02 CATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 CATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA02 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI 160 170 180 190 200 210 250 260 270 280 290 300 KIAA02 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL 220 230 240 250 260 270 310 320 330 340 350 360 KIAA02 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPN :::::::: ::::::: ::.::::.:.:.:: :::::.::::.::.::::.:::.::::. gi|739 IQTHKSQEPQLPEESKPASSKSPLALDAGRATAASEGTHTDGVEEVAGSCSQAPTHSPPS 280 290 300 310 320 330 370 380 390 400 410 420 KIAA02 KPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|739 KPKLVVKPPGSSLNGVPPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP 340 350 360 370 380 390 430 440 450 460 470 480 KIAA02 PQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAE :::::::::::::::.:::::::::.::: :: :::: ::::.::::::::::::::::: gi|739 PQQYSDDEDDYEDDEDDDVQNTNSAIRYKRKGPGKPGPLSGSGDGQLSVLQPNTINVLAE 400 410 420 430 440 450 490 500 510 520 530 540 KIAA02 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|739 KLKESQKDLSIPLSIKTSSGAASPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP 460 470 480 490 500 510 550 560 570 580 590 600 KIAA02 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL 520 530 540 550 560 570 610 620 630 640 650 660 KIAA02 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPK :::::::::::::: :: ::::::::: :::::::.::::: :..:::::::::::::: gi|739 SPLALTEGGKGSSPCSRPSQGSQGSSSPEEKEVVEAVDSREKPGLARPGEPLSGEKYSPK 580 590 600 610 620 630 670 680 690 700 710 720 KIAA02 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN 640 650 660 670 680 690 730 740 750 KIAA02 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ ::::::::::::::::::::::::::::::::::::::: gi|739 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 700 710 720 >>gi|149728610|ref|XP_001493524.1| PREDICTED: BRCA1 asso (726 aa) initn: 3769 init1: 3769 opt: 4603 Z-score: 4466.2 bits: 837.1 E(): 0 Smith-Waterman score: 4603; 95.336% identity (98.354% similar) in 729 aa overlap (31-759:1-726) 10 20 30 40 50 60 KIAA02 GAPGAVGAPGGGSGGEGGPGHGAEGPPRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVE :::::::::::::::::::::::::::::: gi|149 MNKGWLELESDPGLFTLLVEDFGVKGVQVE 10 20 30 70 80 90 100 110 120 KIAA02 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA02 CATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|149 CATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA02 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI 160 170 180 190 200 210 250 260 270 280 290 300 KIAA02 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL 220 230 240 250 260 270 310 320 330 340 350 360 KIAA02 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPN :::::::::::::::: ::.:::..:::.:: ::::..::::.::.:::: :::.::::. gi|149 IQTHKSQESQLPEESKPASGKSPMALEAGRASAASESTHTDGVEEVAGSCPQAPTHSPPS 280 290 300 310 320 330 370 380 390 400 410 420 KIAA02 KPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP :::::::::::::::: :.::::::::::::::::::::::::::::::::::::::::: gi|149 KPKLVVKPPGSSLNGVPPTPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP 340 350 360 370 380 390 430 440 450 460 470 480 KIAA02 PQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAE :::::::::::::::.:::::::::.::: :: :::: ::.:.::::::::::::::::: gi|149 PQQYSDDEDDYEDDEDDDVQNTNSAIRYKRKGPGKPGPLSSSGDGQLSVLQPNTINVLAE 400 410 420 430 440 450 490 500 510 520 530 540 KIAA02 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|149 KLKESQKDLSIPLSIKTSSGAGSPAVAMPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP 460 470 480 490 500 510 550 560 570 580 590 600 KIAA02 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|149 IRSANPTRPSSPVTSHISKVLFGEEDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL 520 530 540 550 560 570 610 620 630 640 650 660 KIAA02 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPK :::::::::::::::::: ::::::: ::::.::.:.::: :.::::::::::::::: gi|149 SPLALTEGGKGSSPSIRP---SQGSSSPEEKEVLEAVDGREKPGLVRPGEPLSGEKYSPK 580 590 600 610 620 670 680 690 700 710 720 KIAA02 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN 630 640 650 660 670 680 730 740 750 KIAA02 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ ::::::::::::::::::::::::::::::::::::::: gi|149 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 690 700 710 720 >>gi|148692855|gb|EDL24802.1| Brca1 associated protein 1 (755 aa) initn: 2718 init1: 2683 opt: 4594 Z-score: 4457.3 bits: 835.4 E(): 0 Smith-Waterman score: 4594; 92.196% identity (96.561% similar) in 756 aa overlap (4-759:1-755) 10 20 30 40 50 60 KIAA02 GAPGAVGAPGGGSGGEGGPGHGAEGPPRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVE : . : ::..: .::::::: : ::::::::::::::::::::::::::::::::: gi|148 GRWALPVGGGAGLAGPGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVE 10 20 30 40 50 70 80 90 100 110 120 KIAA02 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 CATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|148 CATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|148 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPEL 240 250 260 270 280 290 310 320 330 340 350 360 KIAA02 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPN :::::::::::::::: ::.:::: :::.:.:.::: ..::::::.:::: :. .::::. gi|148 IQTHKSQESQLPEESKPASSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPS 300 310 320 330 340 350 370 380 390 400 410 420 KIAA02 KPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP : :::::::::::::: :::.:::::::::::::::::::::::::::::::::::::: gi|148 KCKLVVKPPGSSLNGVPPNPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA02 PQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAE :::::.:::::::..:: ::::: :.::: :::::::.::.:.:::::::::::::::.: gi|148 PQQYSEDEDDYEDEDED-VQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTE 420 430 440 450 460 470 490 500 510 520 530 540 KIAA02 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP ::.:::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KLQESQKDLSVPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP 480 490 500 510 520 530 550 560 570 580 590 600 KIAA02 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL 540 550 560 570 580 590 610 620 630 640 650 660 KIAA02 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPK ::::::::::::::: : :::::::. ::::::.:.::.: :. : .::::::::::: gi|148 SPLALTEGGKGSSPSTRSSQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPK 600 610 620 630 640 650 670 680 690 700 710 720 KIAA02 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN 660 670 680 690 700 710 730 740 750 KIAA02 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ ::::::::::::::::::::::::::::::::::::::: gi|148 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 720 730 740 750 >>gi|68565075|sp|Q99PU7.1|BAP1_MOUSE RecName: Full=Ubiqu (728 aa) initn: 2612 init1: 2577 opt: 4487 Z-score: 4353.7 bits: 816.2 E(): 0 Smith-Waterman score: 4487; 93.416% identity (97.394% similar) in 729 aa overlap (31-759:1-728) 10 20 30 40 50 60 KIAA02 GAPGAVGAPGGGSGGEGGPGHGAEGPPRGKMNKGWLELESDPGLFTLLVEDFGVKGVQVE :::::::::::::::::::::::::::::: gi|685 MNKGWLELESDPGLFTLLVEDFGVKGVQVE 10 20 30 70 80 90 100 110 120 KIAA02 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 EIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA02 CATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|685 CATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA02 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 HLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI 160 170 180 190 200 210 250 260 270 280 290 300 KIAA02 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPEL ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|685 MERIGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPEL 220 230 240 250 260 270 310 320 330 340 350 360 KIAA02 IQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPN :::::::::::::::: ::.:::: :::.:.:.::: ..::::::.:::: :. .::::. gi|685 IQTHKSQESQLPEESKPASSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPS 280 290 300 310 320 330 370 380 390 400 410 420 KIAA02 KPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRP : :::::::::::::: :::.:::::::::::::::::::::::::::::::::::::: gi|685 KCKLVVKPPGSSLNGVPPNPAPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRA 340 350 360 370 380 390 430 440 450 460 470 480 KIAA02 PQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAE :::::.:::::::..:: ::::: :.::: :::::::.::.:.:::::::::::::::.: gi|685 PQQYSEDEDDYEDEDED-VQNTNPAIRYKRKGTGKPGSLSNSSDGQLSVLQPNTINVLTE 400 410 420 430 440 490 500 510 520 530 540 KIAA02 KLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP ::.:::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 KLQESQKDLSVPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSP 450 460 470 480 490 500 550 560 570 580 590 600 KIAA02 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 IRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVL 510 520 530 540 550 560 610 620 630 640 650 660 KIAA02 SPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPK ::::::::::::::: : :::::::. ::::::.:.::.: :. : .::::::::::: gi|685 SPLALTEGGKGSSPSTRSSQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPK 570 580 590 600 610 620 670 680 690 700 710 720 KIAA02 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 ELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLAN 630 640 650 660 670 680 730 740 750 KIAA02 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ ::::::::::::::::::::::::::::::::::::::: gi|685 LVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 690 700 710 720 >>gi|148692856|gb|EDL24803.1| Brca1 associated protein 1 (768 aa) initn: 2461 init1: 2426 opt: 4341 Z-score: 4211.8 bits: 790.1 E(): 0 Smith-Waterman score: 4558; 90.637% identity (94.928% similar) in 769 aa overlap (4-759:1-768) 10 20 30 40 50 KIAA02 GAPGAVGAPGGGSGGEGGPGHGAEGPPRGKMNKGWLELESDPGLFTLLVEDFG------- : . : ::..: .::::::: : :::::::::::::::::::::::::: gi|148 GRWALPVGGGAGLAGPGHGAERPLRGKMNKGWLELESDPGLFTLLVEDFGKNPVTHD 10 20 30 40 50 60 70 80 90 100 KIAA02 ------VKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LRSLAGVKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIV 60 70 80 90 100 110 110 120 130 140 150 160 KIAA02 NNMFFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPEL :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|148 NNMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPEL 120 130 140 150 160 170 170 180 190 200 210 220 KIAA02 AKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWG 180 190 200 210 220 230 230 240 250 260 270 280 KIAA02 EDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLE :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|148 EDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLE 240 250 260 270 280 290 290 300 310 320 330 340 KIAA02 ALQQLIRVTQPELIQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAA ::::::::::::::::::::::::::::: ::.:::: :::.:.:.::: ..::::::.: gi|148 ALQQLIRVTQPELIQTHKSQESQLPEESKPASSKSPLGLEAGRTPVASECTQTDGAEEVA 300 310 320 330 340 350 350 360 370 380 390 400 KIAA02 GSCAQAPSHSPPNKPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDL ::: :. .::::.: :::::::::::::: :::.:::::::::::::::::::::::::: gi|148 GSCPQTTTHSPPSKCKLVVKPPGSSLNGVPPNPAPIVQRLPAFLDNHNYAKSPMQEEEDL 360 370 380 390 400 410 410 420 430 440 450 460 KIAA02 AAGVGRSRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQL :::::::::::: :::::.:::::::..:: ::::: :.::: :::::::.::.:.:::: gi|148 AAGVGRSRVPVRAPQQYSEDEDDYEDEDED-VQNTNPAIRYKRKGTGKPGSLSNSSDGQL 420 430 440 450 460 470 470 480 490 500 510 520 KIAA02 SVLQPNTINVLAEKLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTAS :::::::::::.:::.:::::::.:::::::::::::::::::::::::::::::::::: gi|148 SVLQPNTINVLTEKLQESQKDLSVPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTAS 480 490 500 510 520 530 530 540 550 560 570 580 KIAA02 EIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVI 540 550 560 570 580 590 590 600 610 620 630 640 KIAA02 STGLLHLAEDGVLSPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVR :::::::::::::::::::::::::::: : :::::::. ::::::.:.::.: :. : gi|148 STGLLHLAEDGVLSPLALTEGGKGSSPSTRSSQGSQGSSGLEEKEVVEVTESRDKPGLNR 600 610 620 630 640 650 650 660 670 680 690 700 KIAA02 PGEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICT .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICT 660 670 680 690 700 710 710 720 730 740 750 KIAA02 FISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 720 730 740 750 760 >>gi|149034185|gb|EDL88955.1| Brca1 associated protein 1 (740 aa) initn: 2410 init1: 2364 opt: 4333 Z-score: 4204.2 bits: 788.6 E(): 0 Smith-Waterman score: 4448; 92.049% identity (95.687% similar) in 742 aa overlap (31-759:1-740) 10 20 30 40 50 KIAA02 GAPGAVGAPGGGSGGEGGPGHGAEGPPRGKMNKGWLELESDPGLFTLLVEDFG------- ::::::::::::::::::::::: gi|149 MNKGWLELESDPGLFTLLVEDFGKNPFTPD 10 20 30 60 70 80 90 100 KIAA02 ------VKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RRALAGVKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIV 40 50 60 70 80 90 110 120 130 140 150 160 KIAA02 NNMFFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPEL :.:::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|149 NSMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPEL 100 110 120 130 140 150 170 180 190 200 210 220 KIAA02 AKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWG 160 170 180 190 200 210 230 240 250 260 270 280 KIAA02 EDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLE :::::::::::::::::::::::::::::::::::::::::.:::::::::: ::::::: gi|149 EDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVKYEARLHVLKGNRQTVLE 220 230 240 250 260 270 290 300 310 320 330 340 KIAA02 ALQQLIRVTQPELIQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAA ::::::::::::::::::::::::::::: ::.:::. :::.:.::::: .:::::::.: gi|149 ALQQLIRVTQPELIQTHKSQESQLPEESKPASSKSPFGLEAGRTPAASECTHTDGAEEVA 280 290 300 310 320 330 350 360 370 380 390 400 KIAA02 GSCAQAPSHSPPNKPKLVVKPPGSSLNGVHPNPTPIVQRLPAFLDNHNYAKSPMQEEEDL ::: :. .::::.: :::::: ::::::: :.:::::::::::::::::::::::::::: gi|149 GSCPQTTTHSPPSKSKLVVKPSGSSLNGVPPTPTPIVQRLPAFLDNHNYAKSPMQEEEDL 340 350 360 370 380 390 410 420 430 440 450 460 KIAA02 AAGVGRSRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSALRYKGKGTGKPGALSGSADGQL ::::::::::::: :::::::.::::.::: ::::.::.::: :::::::.::.:.:::: gi|149 AAGVGRSRVPVRP-QQYSDDEEDYEDEEED-VQNTSSAIRYKRKGTGKPGSLSNSSDGQL 400 410 420 430 440 470 480 490 500 510 520 KIAA02 SVLQPNTINVLAEKLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTAS :::::::::::.:::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 SVLQPNTINVLTEKLQESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTAS 450 460 470 480 490 500 530 540 550 560 570 580 KIAA02 EIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVI 510 520 530 540 550 560 590 600 610 620 630 640 KIAA02 STGLLHLAEDGVLSPLALTEGGKGSSPSIRPIQGSQGSSSPVEKEVVEATDSREKTGMVR :::::::::::::::::::::::::::: : :::::::: ::::::.::::.:.:. : gi|149 STGLLHLAEDGVLSPLALTEGGKGSSPSTRSSQGSQGSSSLEEKEVVEVTDSRDKSGLNR 570 580 590 600 610 620 650 660 670 680 690 700 KIAA02 PGEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICT .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SSEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICT 630 640 650 660 670 680 710 720 730 740 750 KIAA02 FISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ 690 700 710 720 730 740 >>gi|114587271|ref|XP_001171939.1| PREDICTED: BRCA1 asso (647 aa) initn: 4234 init1: 4234 opt: 4234 Z-score: 4109.0 bits: 770.8 E(): 0 Smith-Waterman score: 4234; 99.689% identity (99.845% similar) in 644 aa overlap (116-759:4-647) 90 100 110 120 130 140 KIAA02 RRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRM :::::::::::::::::::.:::::::::: gi|114 MSGLIPNSCATHALLSVLLNCSNVDLGPTLSRM 10 20 30 150 160 170 180 190 200 KIAA02 KDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVP 40 50 60 70 80 90 210 220 230 240 250 260 KIAA02 ITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVP 100 110 120 130 140 150 270 280 290 300 310 320 KIAA02 DRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKSASNKSPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKSASNKSPLV 160 170 180 190 200 210 330 340 350 360 370 380 KIAA02 LEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPNKPKLVVKPPGSSLNGVHPNPTPIVQ ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|114 LEANRAPAASEGNHTDGAEEAAGSCAQAPSHSPPNKPKLVVKPPGSSLNGVPPNPTPIVQ 220 230 240 250 260 270 390 400 410 420 430 440 KIAA02 RLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSA 280 290 300 310 320 330 450 460 470 480 490 500 KIAA02 LRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTSSGAGSPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LRYKGKGTGKPGALSGSADGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTSSGAGSPA 340 350 360 370 380 390 510 520 530 540 550 560 KIAA02 VAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGED 400 410 420 430 440 450 570 580 590 600 610 620 KIAA02 DSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSIRPIQGSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTEGGKGSSPSIRPIQGSQGS 460 470 480 490 500 510 630 640 650 660 670 680 KIAA02 SSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SSPVEKEVVEATDSREKTGMVRPGEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVE 520 530 540 550 560 570 690 700 710 720 730 740 KIAA02 KRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKP 580 590 600 610 620 630 750 KIAA02 DRRKRSRPYKAKRQ :::::::::::::: gi|114 DRRKRSRPYKAKRQ 640 759 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 09:11:17 2009 done: Wed Mar 4 09:14:51 2009 Total Scan time: 1553.840 Total Display time: 0.440 Function used was FASTA [version 34.26.5 April 26, 2007]