hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22125683/chunk_1/iprscan-20080501-22125683.nocrc
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Query sequence: KIAA0274
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02383.9.ls SacI homology domain                           600.4   1.5e-177   1
PF02383.9.fs SacI homology domain                           598.5   5.5e-177   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02383.9.fs   1/1     117   455 ..     1   366 []   598.5 5.5e-177
PF02383.9.ls   1/1     117   455 ..     1   366 []   600.4 1.5e-177

Alignments of top-scoring domains:
PF02383.9.fs: domain 1 of 1, from 117 to 455: score 598.5, E = 5.5e-177
                   *->iyGllGlIkLkggdvmLyYLivITgkskVGqigpghaIYkitdvdfi
                      ++G++G++++++g    yY+++IT+++k+++ig ghaIYk++d+++i
    KIAA0274   117    AFGVVGFVRFLEG----YYIVLITKRRKMADIG-GHAIYKVEDTNMI 158  

                   slnndsvdetdiekkDEarylkihPdgisTdtqeklpkhPcslLkkvLst
                   +++ndsv++t++   DEaryl+                    ++++v+++
    KIAA0274   159 YIPNDSVRVTHP---DEARYLR--------------------IFQNVDLS 185  

                   gtFYFSytyDltntLQrnskvlraplenlessvdradesifdi......I
                   ++FYFSy+yDl+++LQ+n +vlr+ple+l+s+++++++++fdi ++++ I
    KIAA0274   186 SNFYFSYSYDLSHSLQYNLTVLRMPLEMLKSEMTQNRQESFDIfedeglI 235  

                   Tdyn...........erFvWNsfLleelinfRshLdneekqqlnverFll
                   T+++++  +  +++ +++vWN++Ll++++            ++ ++++ll
    KIAA0274   236 TQGGsgvfgicsepyMKYVWNGELLDIIK------------STVHRDWLL 273  

                   pvIhGfikqaslyvngktisltLISRRStkRAGTRFlkRGvnddGhVANF
                   ++IhGf++q++l ++g+++++tLI+RRS+k+AGTRFlkRG+n++G+VAN+
    KIAA0274   274 YIIHGFCGQSKLLIYGRPVYVTLIARRSSKFAGTRFLKRGANCEGDVANE 323  

                   VETEQIVydsdskseka.rysSFVQvRGSIPLFWeQdvegsnLsyKPliv
                   VETEQI++d +++s++a++ysS+VQvRGS+PL+W+Qd  +s++++KP+i+
    KIAA0274   324 VETEQILCDASVMSFTAgSYSSYVQVRGSVPLYWSQD--ISTMMPKPPIT 371  

                   lrsveatapafdrHFddlkqrYGnpivIvNLiktkkekEkplsklyeefl
                   l++++++a+++++HFd+++qr+G+pi+I+NL+k+ +ek+k+++ l ee++
    KIAA0274   372 LDQADPFAHVAALHFDQMFQRFGSPIIILNLVKE-REKRKHERILSEELV 420  

                   kaseylnsflpeeekirytsFDFHkeckqmnmswdrl<-*
                    a++yln+flp e  i y+ +D+ k +k++    ++l   
    KIAA0274   421 AAVTYLNQFLPPEHTIVYIPWDMAKYTKSK--LCNVL    455  

PF02383.9.ls: domain 1 of 1, from 117 to 455: score 600.4, E = 1.5e-177
                   *->iyGllGlIkLkggdvmLyYLivITgkskVGqigpghaIYkitdvdfi
                      ++G++G++++++g    yY+++IT+++k+++ig ghaIYk++d+++i
    KIAA0274   117    AFGVVGFVRFLEG----YYIVLITKRRKMADIG-GHAIYKVEDTNMI 158  

                   slnndsvdetdiekkDEarylkihPdgisTdtqeklpkhPcslLkkvLst
                   +++ndsv++t++   DEaryl+                    ++++v+++
    KIAA0274   159 YIPNDSVRVTHP---DEARYLR--------------------IFQNVDLS 185  

                   gtFYFSytyDltntLQrnskvlraplenlessvdradesifdi......I
                   ++FYFSy+yDl+++LQ+n +vlr+ple+l+s+++++++++fdi ++++ I
    KIAA0274   186 SNFYFSYSYDLSHSLQYNLTVLRMPLEMLKSEMTQNRQESFDIfedeglI 235  

                   Tdyn...........erFvWNsfLleelinfRshLdneekqqlnverFll
                   T+++++  +  +++ +++vWN++Ll++++            ++ ++++ll
    KIAA0274   236 TQGGsgvfgicsepyMKYVWNGELLDIIK------------STVHRDWLL 273  

                   pvIhGfikqaslyvngktisltLISRRStkRAGTRFlkRGvnddGhVANF
                   ++IhGf++q++l ++g+++++tLI+RRS+k+AGTRFlkRG+n++G+VAN+
    KIAA0274   274 YIIHGFCGQSKLLIYGRPVYVTLIARRSSKFAGTRFLKRGANCEGDVANE 323  

                   VETEQIVydsdskseka.rysSFVQvRGSIPLFWeQdvegsnLsyKPliv
                   VETEQI++d +++s++a++ysS+VQvRGS+PL+W+Qd  +s++++KP+i+
    KIAA0274   324 VETEQILCDASVMSFTAgSYSSYVQVRGSVPLYWSQD--ISTMMPKPPIT 371  

                   lrsveatapafdrHFddlkqrYGnpivIvNLiktkkekEkplsklyeefl
                   l++++++a+++++HFd+++qr+G+pi+I+NL+k+ +ek+k+++ l ee++
    KIAA0274   372 LDQADPFAHVAALHFDQMFQRFGSPIIILNLVKE-REKRKHERILSEELV 420  

                   kaseylnsflpeeekirytsFDFHkeckqmnmswdrl<-*
                    a++yln+flp e  i y+ +D+ k +k++    ++l   
    KIAA0274   421 AAVTYLNQFLPPEHTIVYIPWDMAKYTKSK--LCNVL    455  

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