hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22263464/chunk_1/iprscan-20080501-22263464.nocrc
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Query sequence: KIAA0282
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00622.18.fs SPRY domain                                     45.2    1.6e-12   1
PF00041.11.fs Fibronectin type III domain                     42.1    1.8e-11   1
PF00041.11.ls Fibronectin type III domain                     44.1    4.3e-10   1
PF00643.14.fs B-box zinc finger                               32.8    1.2e-07   2
PF00643.14.ls B-box zinc finger                               35.7    1.5e-07   2
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           21.1    4.6e-07   1
PF00622.18.ls SPRY domain                                     15.5     0.0011   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1      57    85 ..     1    39 [.    21.1  4.6e-07
PF00643.14.ls   2/2     271   313 ..     1    50 []    32.9  1.1e-06
PF00643.14.fs   2/2     271   313 ..     1    50 []    31.0  3.6e-07
PF00041.11.fs   1/1     486   572 ..     1    84 []    42.1  1.8e-11
PF00041.11.ls   1/1     486   572 ..     1    84 []    44.1  4.3e-10
PF00622.18.ls   1/1     623   711 .]     1   154 []    15.5   0.0011
PF00622.18.fs   1/1     623   708 ..     1   101 [.    45.2  1.6e-12

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 57 to 85: score 21.1, E = 4.6e-07
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwl<-*
                      C++C   + ep      ilpC H       C++C ++ l   
    KIAA0282    57    CPVCGSFYREPI-----ILPCSHN-----LCQACARNIL    85   

PF00643.14.ls: domain 2 of 2, from 271 to 313: score 32.9, E = 1.1e-06
                   *->ekervCpeHgdneklslFCedDgqlLCvvCrlsgeHqanklfrgHtv
                      +k+  C+ H+  e  s++C+++ ++ C +C + g+H      + H v
    KIAA0282   271    RKVSTCTDHE-LENHSMYCVQCKMPVCYQCLEEGKH------SSHEV 310  

                   vpl<-*
                   + l   
    KIAA0282   311 KAL    313  

PF00643.14.fs: domain 2 of 2, from 271 to 313: score 31.0, E = 3.6e-07
                   *->ekervCpeHgdneklslFCedDgqlLCvvCrlsgeHqanklfrgHtv
                      +k+  C+ H+  e  s++C+++ ++ C +C + g+H      + H v
    KIAA0282   271    RKVSTCTDHE-LENHSMYCVQCKMPVCYQCLEEGKH------SSHEV 310  

                   vpl<-*
                   + l   
    KIAA0282   311 KAL    313  

PF00041.11.fs: domain 1 of 1, from 486 to 572: score 42.1, E = 1.8e-11
                   *->P.saPtnltvtdv..tstsltlsWspPt.gngpitgYevtyRqpkng
                      P +a   l+ ++  + ++s+tlsW+ P+    p +gY +++  + ng
    KIAA0282   486    PvPATPILQLEECctHNNSATLSWKQPPlSTVPADGYILEL-DDGNG 531  

                   gewkeltvpgtttsytltgLkPgteYtvrVqAvnggG.GpeS<-*
                   g+ +e+ v + t  +t+ gL  +++Y+ rV+A n  G +p+S   
    KIAA0282   532 GQFREVYVGKET-MCTVDGLHFNSTYNARVKAFNKTGvSPYS    572  

PF00041.11.ls: domain 1 of 1, from 486 to 572: score 44.1, E = 4.3e-10
                   *->P.saPtnltvtdv..tstsltlsWspPt.gngpitgYevtyRqpkng
                      P +a   l+ ++  + ++s+tlsW+ P+    p +gY +++  + ng
    KIAA0282   486    PvPATPILQLEECctHNNSATLSWKQPPlSTVPADGYILEL-DDGNG 531  

                   gewkeltvpgtttsytltgLkPgteYtvrVqAvnggG.GpeS<-*
                   g+ +e+ v + t  +t+ gL  +++Y+ rV+A n  G +p+S   
    KIAA0282   532 GQFREVYVGKET-MCTVDGLHFNSTYNARVKAFNKTGvSPYS    572  

PF00622.18.ls: domain 1 of 1, from 623 to 711: score 15.5, E = 0.0011
                   *->sGkhYfEVevdtgggepthwrvGwatksvhlppgfdlrsskrkgger
                      +G+hY+E +vd ++    + ++G+a+ +v               +++
    KIAA0282   623    KGIHYWELTVDRYDN-HPDPAFGVARMDV--------------MKDV 654  

                   llGddegswgydgsggkkyhagesgepyglpfqe..kgdviGcflDyeag
                   +lG+d++ w+   ++++ ++++++  ++  + +  +kg +iG++lD+   
    KIAA0282   655 MLGKDDKAWAMYVDNNRSWFMHNN-SHTNRTEGGitKGATIGVLLDFNRK 703  

                   VtisFtkNGkyLgdsEshiyaFrnvtfdkkpggpLyPavslgsadgggea
                                          n+tf              ++       
    KIAA0282   704 -----------------------NLTF--------------FY------- 709  

                   irlnfgqlp<-*
                          ++   
    KIAA0282   710 -------QR    711  

PF00622.18.fs: domain 1 of 1, from 623 to 708: score 45.2, E = 1.6e-12
                   *->sGkhYfEVevdtgggepthwrvGwatksvhlppgfdlrsskrkgger
                      +G+hY+E +vd ++    + ++G+a+ +v               +++
    KIAA0282   623    KGIHYWELTVDRYDN-HPDPAFGVARMDV--------------MKDV 654  

                   llGddegswgydgsggkkyhagesgepyglpfqe..kgdviGcflDyeag
                   +lG+d++ w+   ++++ ++++++  ++  + +  +kg +iG++lD+   
    KIAA0282   655 MLGKDDKAWAMYVDNNRSWFMHNN-SHTNRTEGGitKGATIGVLLDFNRK 703  

                   VtisFt<-*
                     ++F+   
    KIAA0282   704 -NLTFF    708  

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