hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22551606/chunk_1/iprscan-20080501-22551606.nocrc
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Query sequence: KIAA0298
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00643.14.ls B-box zinc finger                               48.4    2.3e-11   2
PF00643.14.fs B-box zinc finger                               42.0    4.8e-10   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00643.14.fs   2/2      93   134 ..     1    50 []    32.4  1.5e-07
PF00643.14.ls   2/2      93   134 ..     1    50 []    34.3  4.1e-07

Alignments of top-scoring domains:
PF00643.14.fs: domain 2 of 2, from 93 to 134: score 32.4, E = 1.5e-07
                   *->ekervCpeHgdneklslFCedDgqlLCvvCrlsgeHqanklfrgHtv
                      +   +Cp H  +e+l+lFCe++++l+C++C  + eH      + H+ 
    KIAA0298    93    DFTLYCPLHT-QEVLKLFCETCDMLTCHSCLVV-EH------KEHRC 131  

                   vpl<-*
                   + +   
    KIAA0298   132 RHV    134  

PF00643.14.ls: domain 2 of 2, from 93 to 134: score 34.3, E = 4.1e-07
                   *->ekervCpeHgdneklslFCedDgqlLCvvCrlsgeHqanklfrgHtv
                      +   +Cp H  +e+l+lFCe++++l+C++C  + eH      + H+ 
    KIAA0298    93    DFTLYCPLHT-QEVLKLFCETCDMLTCHSCLVV-EH------KEHRC 131  

                   vpl<-*
                   + +   
    KIAA0298   132 RHV    134  

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