hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23112339/chunk_1/iprscan-20080501-23112339.nocrc
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Query sequence: KIAA0306
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00398                                                  74.4    1.4e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00398    1/1      42   112 ..     1    71 []    74.4  1.4e-17

Alignments of top-scoring domains:
SM00398: domain 1 of 1, from 42 to 112: score 74.4, E = 1.4e-17
                   *->kpKrPmsafmlFsqenRakikkenPdlknaeisKklgerWkeLseee
                      +++rPm+afm+Fs+ +Ra + + +P+  n+ +sK+lge+W +L ++e
    KIAA0306    42    HIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKE 88   

                   KapYeekAekdkeryekempeykk<-*
                   K++Y+++A + ke + k++p++k    
    KIAA0306    89 KQKYHDLAFQVKEAHFKAHPDWKW    112  

//