hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23261303/chunk_1/iprscan-20080501-23261303.nocrc
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Query sequence: KIAA0313
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00147                                                 348.8   3.5e-100   1
SM00229                                                 120.6    1.8e-31   1
SM00314                                                  89.7    3.5e-22   1
SM00228                                                  67.0    2.4e-15   1
SM00100                                                  66.5    3.3e-15   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00100     1/1     144   262 ..     1   123 []    66.5  3.3e-15
SM00229     1/1     276   389 ..     1   172 []   120.6  1.8e-31
SM00228     1/1     404   476 ..     1    80 []    67.0  2.4e-15
SM00314     1/1     615   701 ..     1   102 []    89.7  3.5e-22
SM00147     1/1     722   959 ..     1   261 []   348.8 3.5e-100

Alignments of top-scoring domains:
SM00100: domain 1 of 1, from 144 to 262: score 66.5, E = 3.3e-15
                   *->lfkaldaeelreladalep.vrypaGevifrqGdpgdsfYiivsGev
                       f++++++ +rel++++   v+ +aG++++  G+  ds+ +i++G+v
    KIAA0313   144    AFANMTMSVRRELCAVMVFaVVERAGTIVLNDGEELDSWSVILNGSV 190  

                   evyktrlstledgreqilatlgpGdfFGElall.....rrarsaaavalv
                   ev++          +   ++l  G++FG+ + ++++       + ++ + 
    KIAA0313   191 EVTYP---------DGKAEILCMGNSFGVSPTMdkeymKGVMRTKVDDC- 230  

                   elatllridferflqllpenpqlllelllell<-*
                   +++++ + d++r+l+++++n+q+  e+ +      
    KIAA0313   231 QFVCIAQQDYCRILNQVEKNMQKVEEEGEIVM    262  

SM00229: domain 1 of 1, from 276 to 389: score 120.6, E = 1.8e-31
                   *->ckggliKgGtlekLiehLteardkgkvdlkaDptfvetFLlTYRsFi
                       ++ +iK Gt e+L +hL+e+++      ++Dptf+e+FLlTYR+F 
    KIAA0313   276    KGHIVIK-GTSERLTMHLVEEHS------VVDPTFIEDFLLTYRTFL 315  

                   ttqeLlqkLldrYnaippeivsrSlelkateaseglsfedysknaipvgf
                   +++   +k+l  ++ +p+                                
    KIAA0313   316 SSPMEVGKKLLEWFNDPSL------------------------------- 334  

                   aetdiivkekvnprriqnrVlnilrlWvenywedFeedpklnlfLeelfl
                                   +++V ++++lWv+n+++dFe+dp +++fLee f+
    KIAA0313   335 ----------------RDKVTRVVLLWVNNHFNDFEGDPAMTRFLEE-FE 367  

                   elvedkkdkgpglekslanilerls<-*
                   + +e++    +g++ +l+ni+++ +   
    KIAA0313   368 NNLERE---KMGGHLRLLNIACAAK    389  

SM00228: domain 1 of 1, from 404 to 476: score 67.0, E = 2.4e-15
                   *->gglGfsivg......gifvssvvpGspAakaGrkslglLkvGDvIle
                      ++l f + g+++++ gifv sv  Gs A  aG      Lk GD+Ile
    KIAA0313   404    APLPFILLGgsekgfGIFVDSVDSGSKATEAG------LKRGDQILE 444  

                   VNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   VNG ++ e+     a+++l++      ++++++tv+ +    
    KIAA0313   445 VNG-QNFENIQLSKAMEILRN------NTHLSITVKTNL    476  

SM00314: domain 1 of 1, from 615 to 701: score 89.7, E = 3.5e-22
                   *->dtyvlrVyvddlsavdpgqtyktlrvskrtTardViqqllekfhltd
                        +vlrV+ +d       q+++++++sk+tTa++V+ q++++f +t+
    KIAA0313   615    PDQVLRVFKAD-------QQSRYIMISKDTTAKEVVIQAIREFAVTA 654  

                   edpeeYvLvevlpsggkErvLlddenPlqlqklwprdaksprqsslrFvL
                    +p++Y+L+ev+  +  E v++++++P ql kl+ r+     q s r++L
    KIAA0313   655 -TPDQYSLCEVS--VTPEGVIKQRRLPDQLSKLADRI-----QLSGRYYL 696  

                   rkrdd<-*
                   ++++    
    KIAA0313   697 KNNME    701  

SM00147: domain 1 of 1, from 722 to 959: score 348.8, E = 3.5e-100
                   *->lllldpeelAeQLTlldfelFrkIepsEllgsvwgkrskkspsplap
                      ll+l+++e+A+QL+++ felFr+Iep+E+++ +++ rsk s++    
    KIAA0313   722    LLQLSTVEVATQLSMRNFELFRNIEPTEYIDDLFKLRSKTSCA---- 764  

                   qnleafierfNevsnwVateIlkqttlkpkkRaevlskFIkVAkhcreLn
                    nl++f e+ N+ ++wVa+eIl++t+    kR++++++FIk+A hcre++
    KIAA0313   765 -NLKRFEEVINQETFWVASEILRETN--QLKRMKIIKHFIKIALHCRECK 811  

                   NFnSlmAIvsaLssspIsRLkkTWeklsskykklfeeLeelldpserNfk
                   NFnS++AI+s+L+ +p+ RL+ TWekl++ky+klf++L++l+dps rN+ 
    KIAA0313   812 NFNSMFAIISGLNLAPVARLRTTWEKLPNKYEKLFQDLQDLFDPS-RNMA 860  

                   nYReaLkscnkspnvqppcvPflGvyLkDLtfidegnpdflengtkglvN
                   +YR++L+s n+    qpp++P ++v+ kDLtf++egn+  ++    glvN
    KIAA0313   861 KYRNVLNSQNL----QPPIIPLFPVIKKDLTFLHEGNDSKVD----GLVN 902  

                   FeKrrkiakilreirqlqsacqpynlkpnrndiqellrasrplevlpeee
                   FeK+r+iak +r++ +++s  ++++++ ++++ ++ +r+   l++l++  
    KIAA0313   903 FEKLRMIAKEIRHVGRMAS--VNMDPALMFRTRKKKWRS---LGSLSQG- 946  

                   delyelSlriEPrv<-*
                      ++  l +   +   
    KIAA0313   947 -STNATVLDVAQTG    959  

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