hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23325933/chunk_1/iprscan-20080501-23325933.nocrc
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Query sequence: KIAA0317
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00632.15.ls HECT-domain (ubiquitin-transferase)            455.1   8.4e-134   1
PF00632.15.fs HECT-domain (ubiquitin-transferase)            453.2   3.1e-133   1
PF00630.9.fs Filamin/ABP280 repeat                           20.7    1.6e-05   1
PF00630.9.ls Filamin/ABP280 repeat                           -1.5     0.0011   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00630.9.ls   1/1      71   158 ..     1    97 []    -1.5   0.0011
PF00630.9.fs   1/1     131   158 ..    70    97 .]    20.7  1.6e-05
PF00632.15.fs   1/1     515   826 .]     1   351 []   453.2 3.1e-133
PF00632.15.ls   1/1     515   826 .]     1   351 []   455.1 8.4e-134

Alignments of top-scoring domains:
PF00630.9.ls: domain 1 of 1, from 71 to 158: score -1.5, E = 0.0011
                   *->DaskVkAyGPGLeptggkvgkPAeFtvdavdag...........get
                      D+  V     G    + ++++   F    ++ g++ + +++ +  ++
    KIAA0317    71    DPYEV-----G----HSMAFRVHLFY---KN-GqpfpahrpvglRVH 104  

                   lAaGggglsVkVeGPsgapvevkvtDngDGTYtVsYtPtepGdYtvnVty
                    +    +++++Ve P  +  ev  + n  +   V++t +++G Y+++V++
    KIAA0317   105 IS----HVELAVEIPVTQ--EVLQEPNS-NVVKVAFTVRKAGRYEITVKL 147  

                   gGehIPgSPFk<-*
                   gG +++ SP+    
    KIAA0317   148 GGLNVAYSPYY    158  

PF00630.9.fs: domain 1 of 1, from 131 to 158: score 20.7, E = 1.6e-05
                   *->VsYtPtepGdYtvnVtygGehIPgSPFk<-*
                      V++t +++G Y+++V++gG +++ SP+    
    KIAA0317   131    VAFTVRKAGRYEITVKLGGLNVAYSPYY    158  

PF00632.15.fs: domain 1 of 1, from 515 to 826: score 453.2, E = 3.1e-133
                   *->tLlsrelfnPdygLFeysddtdvnesgyaedsytlqinPlssesnpe
                       L+++ lf++ ++LF++             d+++  ++P++  ++++
    KIAA0317   515    ELICKALFDTTNQLFTR-----------FSDNNQALVHPNPNRPAHL 550  

                   hlkyFkFiGrilGlAlyn.......grlldvpFpraFYKkLLmkgkpvtl
                   +lk+++F+Gr++G++ly+++ ++  ++l+ ++F+r+F+ +++  g+++++
    KIAA0317   551 RLKMYEFAGRLVGKCLYEsslggayKQLVRARFTRSFLAQII--GLRMHY 598  

                   eDlesvDPelynS.LkwllendgdrhILLgsledveedLeLtFsveeess
                   + +e  DPe+y+S+ +++l+nd++             ++eL F +ee ++
    KIAA0317   599 KYFETDDPEFYKSkVCFILNNDMS-------------EMELVF-AEEKYN 634  

                   a.g.fdpdasdfGetktveELkPnGrnIpVTneNkkeYVeLyveyrLnkg
                   ++g++          k+ve L  +G+ +pVTn+Nk+ Y++L+++yrL  +
    KIAA0317   635 KsGqL---------DKVVE-LMTGGAQTPVTNANKIFYLNLLAQYRLASQ 674  

                   iekQfeAFrkGFnevipsrlLslFdpeELelLicGspepiDvddLksnTe
                   +++ +e+F+kG+ne++p++lL++Fd++ELelL+cG+++ i+v+d+k++ +
    KIAA0317   675 VKEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGD-ISVSDFKAHAV 723  

                   YkggYtedsplktIqwFWevveeftqeerkkLLqFvTGssRvPlgGFkaL
                     gg++   + k+ +wFW vv+++tqee ++LLqF+TGss++P+gGF+aL
    KIAA0317   724 VVGGSWHFRE-KVMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAAL 772  

                   qgpGsnGppkFtIekvgvggdddrLPtAHTCFNrLdLPpYsSkEiLrekL
                           p+F+I  +   ++++ LPtAHTCFN+L+LP Y S+E+ +++L
    KIAA0317   773 C-------PSFQIIAA---PTHSTLPTAHTCFNQLCLPTYDSYEEVHRML 812  

                   llAIneeteGFgle<-*
                    lAI+e++eGFg++   
    KIAA0317   813 QLAISEGCEGFGML    826  

PF00632.15.ls: domain 1 of 1, from 515 to 826: score 455.1, E = 8.4e-134
                   *->tLlsrelfnPdygLFeysddtdvnesgyaedsytlqinPlssesnpe
                       L+++ lf++ ++LF++             d+++  ++P++  ++++
    KIAA0317   515    ELICKALFDTTNQLFTR-----------FSDNNQALVHPNPNRPAHL 550  

                   hlkyFkFiGrilGlAlyn.......grlldvpFpraFYKkLLmkgkpvtl
                   +lk+++F+Gr++G++ly+++ ++  ++l+ ++F+r+F+ +++  g+++++
    KIAA0317   551 RLKMYEFAGRLVGKCLYEsslggayKQLVRARFTRSFLAQII--GLRMHY 598  

                   eDlesvDPelynS.LkwllendgdrhILLgsledveedLeLtFsveeess
                   + +e  DPe+y+S+ +++l+nd++             ++eL F +ee ++
    KIAA0317   599 KYFETDDPEFYKSkVCFILNNDMS-------------EMELVF-AEEKYN 634  

                   a.g.fdpdasdfGetktveELkPnGrnIpVTneNkkeYVeLyveyrLnkg
                   ++g++          k+ve L  +G+ +pVTn+Nk+ Y++L+++yrL  +
    KIAA0317   635 KsGqL---------DKVVE-LMTGGAQTPVTNANKIFYLNLLAQYRLASQ 674  

                   iekQfeAFrkGFnevipsrlLslFdpeELelLicGspepiDvddLksnTe
                   +++ +e+F+kG+ne++p++lL++Fd++ELelL+cG+++ i+v+d+k++ +
    KIAA0317   675 VKEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGD-ISVSDFKAHAV 723  

                   YkggYtedsplktIqwFWevveeftqeerkkLLqFvTGssRvPlgGFkaL
                     gg++   + k+ +wFW vv+++tqee ++LLqF+TGss++P+gGF+aL
    KIAA0317   724 VVGGSWHFRE-KVMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAAL 772  

                   qgpGsnGppkFtIekvgvggdddrLPtAHTCFNrLdLPpYsSkEiLrekL
                           p+F+I  +   ++++ LPtAHTCFN+L+LP Y S+E+ +++L
    KIAA0317   773 C-------PSFQIIAA---PTHSTLPTAHTCFNQLCLPTYDSYEEVHRML 812  

                   llAIneeteGFgle<-*
                    lAI+e++eGFg++   
    KIAA0317   813 QLAISEGCEGFGML    826  

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