# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg01015.fasta.nr -Q ../query/KIAA0334.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0334, 848 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7812682 sequences Expectation_n fit: rho(ln(x))= 6.3014+/-0.000199; mu= 8.2273+/- 0.011 mean_var=117.7529+/-22.310, 0's: 42 Z-trim: 101 B-trim: 3 in 1/66 Lambda= 0.118192 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|6166009|sp|O15516.1|CLOCK_HUMAN RecName: Full=C ( 846) 5563 960.2 0 gi|73909162|gb|AAH41878.1| CLOCK protein [Homo sap ( 846) 5560 959.7 0 gi|62898830|dbj|BAD97269.1| clock variant [Homo sa ( 846) 5555 958.9 0 gi|114594708|ref|XP_001143582.1| PREDICTED: clock ( 847) 5551 958.2 0 gi|6478192|gb|AAF13733.1| clock [Homo sapiens] ( 845) 5550 958.0 0 gi|75070732|sp|Q5RAK8.1|CLOCK_PONAB RecName: Full= ( 846) 5532 954.9 0 gi|114594720|ref|XP_001143962.1| PREDICTED: clock ( 847) 5492 948.1 0 gi|194209149|ref|XP_001492839.2| PREDICTED: clock ( 846) 5423 936.3 0 gi|157780889|gb|ABV71922.1| clock [Ovis aries] ( 845) 5377 928.5 0 gi|73975295|ref|XP_532376.2| PREDICTED: similar to ( 837) 5376 928.3 0 gi|114594724|ref|XP_001143505.1| PREDICTED: clock ( 780) 5122 885.0 0 gi|81916241|sp|Q91YB0.1|CLOCK_SPAGA RecName: Full= ( 865) 4927 851.8 0 gi|81916242|sp|Q91YB2.1|CLOCK_SPACA RecName: Full= ( 865) 4919 850.4 0 gi|82206300|sp|Q6YGZ4.1|CLOCK_TYTAL RecName: Full= ( 851) 4917 850.1 0 gi|149035205|gb|EDL89909.1| clock homolog (mouse), ( 863) 4901 847.3 0 gi|81917913|sp|Q9WVS9.1|CLOCK_RAT RecName: Full=Ci ( 862) 4886 844.8 0 gi|5921794|sp|O08785.1|CLOCK_MOUSE RecName: Full=C ( 855) 4879 843.6 0 gi|81916239|sp|Q91YA8.1|CLOCK_SPAJD RecName: Full= ( 865) 4873 842.6 0 gi|19773562|gb|AAL98708.1|AF246959_1 CLOCK [Gallus ( 853) 4845 837.8 0 gi|4903294|gb|AAD32860.1|AF144425_1 CLOCK protein ( 853) 4841 837.1 0 gi|9581833|dbj|BAB03454.1| circadian clock protein ( 854) 4815 832.7 0 gi|6715306|gb|AAF26365.1|AF201076_1 bHLH/PAS trans ( 852) 4737 819.4 0 gi|114594722|ref|XP_517282.2| PREDICTED: clock iso ( 702) 4617 798.8 0 gi|189441921|gb|AAI67652.1| Clock protein [Xenopus ( 829) 4374 757.5 5.3e-216 gi|149634856|ref|XP_001507170.1| PREDICTED: hypoth ( 847) 4297 744.3 4.8e-212 gi|6984144|gb|AAF34772.1|AF227985_1 Clock [Xenopus ( 825) 4277 740.9 5e-211 gi|6466210|gb|AAF12827.1|AF203107_1 circadian rhyt ( 778) 3981 690.4 7.5e-196 gi|55962414|emb|CAI11969.1| clock [Danio rerio] ( 892) 3721 646.1 1.8e-182 gi|190339127|gb|AAI63244.1| Clock protein [Danio r ( 892) 3715 645.1 3.7e-182 gi|4680719|gb|AAD27749.1|AF133306_1 transcription ( 893) 3665 636.6 1.4e-179 gi|118572227|sp|Q8QGQ6.2|CLOCK_CHICK RecName: Full ( 875) 3501 608.6 3.5e-171 gi|5442153|gb|AAD43283.1|AF132531_1 CLOCK [Gallus ( 875) 3477 604.5 6e-170 gi|149035206|gb|EDL89910.1| clock homolog (mouse), ( 833) 3268 568.9 3.1e-159 gi|15822818|dbj|BAB68768.1| CLOCK-S [Rattus norveg ( 832) 3239 563.9 9.6e-158 gi|87280966|gb|ABD36590.1| CLOCK [Podarcis sicula] ( 510) 2956 515.5 2.2e-143 gi|145881077|gb|ABP97104.1| Clock [Astatotilapia b ( 872) 2877 502.2 3.8e-139 gi|21685552|dbj|BAC02687.1| bHLH-PAS transcription ( 813) 2818 492.1 3.8e-136 gi|190338076|gb|AAI62682.1| Clock3 protein [Danio ( 820) 2817 492.0 4.3e-136 gi|113204808|gb|ABI34137.1| CLOCK1a [Oncorhynchus ( 746) 2705 472.8 2.3e-130 gi|194685031|ref|XP_001254268.2| PREDICTED: simila ( 508) 2680 468.4 3.3e-129 gi|113204806|gb|ABI34136.1| CLOCK1a [Oncorhynchus ( 721) 2590 453.2 1.8e-124 gi|148705948|gb|EDL37895.1| circadian locomoter ou ( 417) 2576 450.6 6.2e-124 gi|114579259|ref|XP_515656.2| PREDICTED: neuronal (1383) 2578 451.4 1.2e-123 gi|221040198|dbj|BAH11862.1| unnamed protein produ ( 889) 2574 450.6 1.4e-123 gi|121647028|gb|ABM64214.1| neuronal PAS domain pr ( 824) 2568 449.5 2.6e-123 gi|118572678|sp|Q99743.2|NPAS2_HUMAN RecName: Full ( 824) 2567 449.3 3e-123 gi|109103979|ref|XP_001105763.1| PREDICTED: simila ( 824) 2567 449.3 3e-123 gi|149410961|ref|XP_001512993.1| PREDICTED: simila ( 773) 2563 448.6 4.5e-123 gi|1840060|gb|AAB47250.1| neuronal PAS2 [Homo sapi ( 824) 2558 447.8 8.6e-123 gi|73970055|ref|XP_531781.2| PREDICTED: similar to ( 878) 2548 446.1 2.9e-122 >>gi|6166009|sp|O15516.1|CLOCK_HUMAN RecName: Full=Circa (846 aa) initn: 5563 init1: 5563 opt: 5563 Z-score: 5129.8 bits: 960.2 E(): 0 Smith-Waterman score: 5563; 100.000% identity (100.000% similar) in 846 aa overlap (3-848:1-846) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 MLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 50 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 480 490 500 510 520 530 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT 600 610 620 630 640 650 670 680 690 700 710 720 KIAA03 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV 660 670 680 690 700 710 730 740 750 760 770 780 KIAA03 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL 720 730 740 750 760 770 790 800 810 820 830 840 KIAA03 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP 780 790 800 810 820 830 KIAA03 DPSKVQPQ :::::::: gi|616 DPSKVQPQ 840 >>gi|73909162|gb|AAH41878.1| CLOCK protein [Homo sapiens (846 aa) initn: 5560 init1: 5560 opt: 5560 Z-score: 5127.0 bits: 959.7 E(): 0 Smith-Waterman score: 5560; 99.882% identity (100.000% similar) in 846 aa overlap (3-848:1-846) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 50 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|739 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFISNEEFTQLMLEAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 480 490 500 510 520 530 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT 600 610 620 630 640 650 670 680 690 700 710 720 KIAA03 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV 660 670 680 690 700 710 730 740 750 760 770 780 KIAA03 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL 720 730 740 750 760 770 790 800 810 820 830 840 KIAA03 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP 780 790 800 810 820 830 KIAA03 DPSKVQPQ :::::::: gi|739 DPSKVQPQ 840 >>gi|62898830|dbj|BAD97269.1| clock variant [Homo sapien (846 aa) initn: 5555 init1: 5555 opt: 5555 Z-score: 5122.4 bits: 958.9 E(): 0 Smith-Waterman score: 5555; 99.882% identity (100.000% similar) in 846 aa overlap (3-848:1-846) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 MLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 50 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 480 490 500 510 520 530 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|628 GQVVPTNQIQSGMNTAHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT 600 610 620 630 640 650 670 680 690 700 710 720 KIAA03 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV 660 670 680 690 700 710 730 740 750 760 770 780 KIAA03 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL 720 730 740 750 760 770 790 800 810 820 830 840 KIAA03 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP 780 790 800 810 820 830 KIAA03 DPSKVQPQ :::::::: gi|628 DPSKVQPQ 840 >>gi|114594708|ref|XP_001143582.1| PREDICTED: clock isof (847 aa) initn: 5040 init1: 5040 opt: 5551 Z-score: 5118.7 bits: 958.2 E(): 0 Smith-Waterman score: 5551; 99.882% identity (99.882% similar) in 847 aa overlap (3-848:1-847) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 50 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 480 490 500 510 520 530 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT 600 610 620 630 640 650 670 680 690 700 710 720 KIAA03 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV 660 670 680 690 700 710 730 740 750 760 770 KIAA03 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQ-SSQEQQLTSVQQPSQAQ :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|114 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQQSSQEQQLTSVQQPSQAQ 720 730 740 750 760 770 780 790 800 810 820 830 KIAA03 LTQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LTQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSL 780 790 800 810 820 830 840 KIAA03 PDPSKVQPQ ::::::::: gi|114 PDPSKVQPQ 840 >>gi|6478192|gb|AAF13733.1| clock [Homo sapiens] (845 aa) initn: 5550 init1: 5550 opt: 5550 Z-score: 5117.8 bits: 958.0 E(): 0 Smith-Waterman score: 5550; 99.882% identity (99.882% similar) in 845 aa overlap (3-847:1-845) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 MLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 50 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|647 EALERFDHSPTPSASSRSSRKPSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 480 490 500 510 520 530 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT 600 610 620 630 640 650 670 680 690 700 710 720 KIAA03 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV 660 670 680 690 700 710 730 740 750 760 770 780 KIAA03 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL 720 730 740 750 760 770 790 800 810 820 830 840 KIAA03 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|647 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP 780 790 800 810 820 830 KIAA03 DPSKVQPQ ::::::: gi|647 DPSKVQP 840 >>gi|75070732|sp|Q5RAK8.1|CLOCK_PONAB RecName: Full=Circ (846 aa) initn: 5532 init1: 5532 opt: 5532 Z-score: 5101.2 bits: 954.9 E(): 0 Smith-Waterman score: 5532; 99.409% identity (99.764% similar) in 846 aa overlap (3-848:1-846) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 50 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|750 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFASRHSLEWKFLFLDHRAPPIIG 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK :::::::::::::::::::::::::::::::.::::::: :::::::::::::::::::: gi|750 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELSIEESLPEIAADKSQDSGSDNRINTVSLK 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 480 490 500 510 520 530 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|750 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQPNPGLNFGSVQLSSGNSSNIQQLAPINMQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT 600 610 620 630 640 650 670 680 690 700 710 720 KIAA03 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV 660 670 680 690 700 710 730 740 750 760 770 780 KIAA03 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|750 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQRQQQSSQEQQLTSVQQPSQAQL 720 730 740 750 760 770 790 800 810 820 830 840 KIAA03 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP 780 790 800 810 820 830 KIAA03 DPSKVQPQ :::::::: gi|750 DPSKVQPQ 840 >>gi|114594720|ref|XP_001143962.1| PREDICTED: clock isof (847 aa) initn: 4981 init1: 4981 opt: 5492 Z-score: 5064.4 bits: 948.1 E(): 0 Smith-Waterman score: 5492; 98.819% identity (99.292% similar) in 847 aa overlap (3-848:1-847) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 50 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK ::::::::::::::::::::::::::::::::::. . . :. :::::::::::::::: gi|114 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEDPVSKIHASYSQDSGSDNRINTVSLK 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 480 490 500 510 520 530 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT 600 610 620 630 640 650 670 680 690 700 710 720 KIAA03 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV 660 670 680 690 700 710 730 740 750 760 770 KIAA03 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQ-SSQEQQLTSVQQPSQAQ :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|114 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQQSSQEQQLTSVQQPSQAQ 720 730 740 750 760 770 780 790 800 810 820 830 KIAA03 LTQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LTQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSL 780 790 800 810 820 830 840 KIAA03 PDPSKVQPQ ::::::::: gi|114 PDPSKVQPQ 840 >>gi|194209149|ref|XP_001492839.2| PREDICTED: clock homo (846 aa) initn: 5402 init1: 5402 opt: 5423 Z-score: 5000.8 bits: 936.3 E(): 0 Smith-Waterman score: 5423; 97.403% identity (99.410% similar) in 847 aa overlap (3-848:1-846) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG ::::::::::::..::::.::::::::::::::::::::::::::::::::::::::: gi|194 MLFTVSCSKMSSMIDRDDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 50 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|194 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSTSAHNGFEGTIQ 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|194 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKGQDSGSDNRINTVSLK 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|194 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMAQRRS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE :::::::::::::.::::::::::.::::::::::::::::::::::::::::::::::: gi|194 SFSSQSINSQSVGQSLTQPVMSQAANLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 480 490 500 510 520 530 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::.:: gi|194 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSTPGLNFGSVQLSSGNSSNIQQLAPISMQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT :::: ::::::::::::::::::.::::::::::.::::::::::.:::::::::::::: gi|194 GQVVQTNQIQSGMNTGHIGTTQHVIQQQTLQSTSSQSQQNVLSGHNQQTSLPSQTQSTLT 600 610 620 630 640 650 670 680 690 700 710 720 KIAA03 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV :::::::::::::::::::::::.: :::::::::::::::::::::::::::::::::: gi|194 APLYNTMVISQPAAGSMVQIPSSVPPNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV 660 670 680 690 700 710 730 740 750 760 770 KIAA03 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSS-QEQQLTSVQQPSQAQ :::::::::.:::::::::::::::::: :::::::::::::.: :::::.::::::::: gi|194 ACGAVMVPSAMLMGQVVTAYPTFATQQQ-SQTLSVTQQQQQQQSGQEQQLASVQQPSQAQ 720 730 740 750 760 770 780 790 800 810 820 830 KIAA03 LTQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LTQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSL 780 790 800 810 820 830 840 KIAA03 PDPSKVQPQ :::::::: gi|194 TDPSKVQPQ 840 >>gi|157780889|gb|ABV71922.1| clock [Ovis aries] gi| (845 aa) initn: 4143 init1: 4143 opt: 5377 Z-score: 4958.4 bits: 928.5 E(): 0 Smith-Waterman score: 5377; 96.576% identity (98.701% similar) in 847 aa overlap (3-848:1-845) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG ::::::::::::.:::::.::::::::::::::::::::::::::::::::::::::: gi|157 MLFTVSCSKMSSLVDRDDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 50 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|157 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSTSAHNGFEGTIQ 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|157 RTHRPSYEDRVCFVATVRLATPQFVKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|157 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMAQRRS 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE ::::::::::.::.:::::::::..:::.: ::::::::::::::::::::::::::::: gi|157 SFSSQSINSQTVGQSLTQPVMSQSANLPVPPGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 480 490 500 510 520 530 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ ::::::::::::::::::::::::::::::::. :::::::::::::::::::::::::: gi|157 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSTSGLNFGSVQLSSGNSSNIQQLAPINMQ 540 550 560 570 580 590 610 620 630 640 650 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQ-SQQNVLSGHSQQTSLPSQTQSTL .::: :::::::::::::::::::::::::::::.: ::::::::::::::::::::::: gi|157 SQVVQTNQIQSGMNTGHIGTTQHMIQQQTLQSTSSQQSQQNVLSGHSQQTSLPSQTQSTL 600 610 620 630 640 650 660 670 680 690 700 710 KIAA03 TAPLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAP .::::::::::::.:::::::::::::::.:::::::::::::::::::::::::::::: gi|157 AAPLYNTMVISQPTAGSMVQIPSSMPQNSSQSAAVTTFTQDRQIRFSQGQQLVTKLVTAP 660 670 680 690 700 710 720 730 740 750 760 770 KIAA03 VACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQ ::::::::::.:::::::::::::: :: ::::::::::: :::::: : ::::::::: gi|157 VACGAVMVPSAMLMGQVVTAYPTFAPQQPQSQTLSVTQQQ--QSSQEQPLPSVQQPSQAQ 720 730 740 750 760 770 780 790 800 810 820 830 KIAA03 LTQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|157 LTQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTESL 780 790 800 810 820 830 840 KIAA03 PDPSKVQPQ :::::::: gi|157 TDPSKVQPQ 840 >>gi|73975295|ref|XP_532376.2| PREDICTED: similar to clo (837 aa) initn: 5376 init1: 5376 opt: 5376 Z-score: 4957.5 bits: 928.3 E(): 0 Smith-Waterman score: 5376; 97.252% identity (99.283% similar) in 837 aa overlap (12-848:1-837) 10 20 30 40 50 60 KIAA03 YVMLFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG :::::::.:.::::::::::::::::::::::::::::::::::::::: gi|739 MSSIVDREDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELG 10 20 30 40 70 80 90 100 110 120 KIAA03 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 50 60 70 80 90 100 130 140 150 160 170 180 KIAA03 DGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESD :::::::::::::::::::.::::::::::::::::::::::::::::::.::::::::: gi|739 DGFFLAIMTDGSIIYVSESITSLLEHLPSDLVDQSIFNFIPEGEHSEVYKMLSTHLLESD 110 120 130 140 150 160 190 200 210 220 230 240 KIAA03 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSSSAHNGFEGTIQ ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|739 SLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSTSAHNGFEGTIQ 170 180 190 200 210 220 250 260 270 280 290 300 KIAA03 RTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RTHRPSYDDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIG 230 240 250 260 270 280 310 320 330 340 350 360 KIAA03 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYIT 290 300 310 320 330 340 370 380 390 400 410 420 KIAA03 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLK 350 360 370 380 390 400 430 440 450 460 470 480 KIAA03 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMVQRRS :::::::::::::::::::::::::::::::::::::::::::::: :::.::::. ::. gi|739 EALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRPHLPSHEKMAPRRA 410 420 430 440 450 460 490 500 510 520 530 540 KIAA03 SFSSQSINSQSVGSSLTQPVMSQATNLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE :::::::::::::.:::::.::::.::::::::::::::::::::::::::::::::::: gi|739 SFSSQSINSQSVGQSLTQPAMSQAANLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIE 470 480 490 500 510 520 550 560 570 580 590 600 KIAA03 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLAPINMQ ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|739 ANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSTPGLNFGSVQLSSGNSSNIQQLAPINMQ 530 540 550 560 570 580 610 620 630 640 650 660 KIAA03 GQVVPTNQIQSGMNTGHIGTTQHMIQQQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLT :::: :::::::::::::::::::: ::::::::.::::::::::::::::::::::::: gi|739 GQVVQTNQIQSGMNTGHIGTTQHMIPQQTLQSTSSQSQQNVLSGHSQQTSLPSQTQSTLT 590 600 610 620 630 640 670 680 690 700 710 720 KIAA03 APLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|739 APLYNTMVISQPAAGGMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPV 650 660 670 680 690 700 730 740 750 760 770 780 KIAA03 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLTSVQQPSQAQL :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|739 ACGAVMVPSTMLMGQVVTAYPTFATQQQQSQTLSVTQQQQQQSSQEQQLASVQQPSQAQL 710 720 730 740 750 760 790 800 810 820 830 840 KIAA03 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|739 TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTDSVT 770 780 790 800 810 820 KIAA03 DPSKVQPQ ::::: :: gi|739 DPSKVPPQ 830 848 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 13:53:39 2009 done: Wed Mar 4 13:57:17 2009 Total Scan time: 1648.880 Total Display time: 0.570 Function used was FASTA [version 34.26.5 April 26, 2007]