hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00261876/chunk_1/iprscan-20080502-00261876.nocrc
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Query sequence: KIAA0347
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00091                                                  33.5      3e-05   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00091    1/2     207   274 ..     1    68 []    10.1       15
SM00091    2/2     347   413 ..     1    68 []    23.4    0.031

Alignments of top-scoring domains:
SM00091: domain 1 of 2, from 207 to 274: score 10.1, E = 15
                   *->erlraileslpdgiivld.ldGrilyaNpaaeellGyspeeliGksl
                         ++i+ +++++ ++++   G+ily+++ ++ ++   ++   +  +
    KIAA0347   207    VTSEHIVKNADMFAVAVSlVSGKILYISDQVASIFHCKRDAFSDAKF 253  

                   lelihpedrlleevqe.lqrlla<-*
                    e++ p d     +     +      
    KIAA0347   254 VEFLAPHDV--GVFHSfTSPYKL    274  

SM00091: domain 2 of 2, from 347 to 413: score 23.4, E = 0.031
                   *->erlraileslpdgiivldldGrilyaNpaaeellGyspeeliGksll
                       +  +i      +   ++++  + +++++a  llGy p++li++++l
    KIAA0347   347    YEAPRIPPEKRIFTTTHTPNCLFQDVDERAVPLLGYLPQDLIETPVL 393  

                   elihpedrlleevqe.lqrlla<-*
                     +hp dr  + +++ +++ l+   
    KIAA0347   394 VQLHPSDR--PLMLAiHKKILQ    413  

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