hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01014173/chunk_1/iprscan-20080502-01014173.nocrc
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Query sequence: KIAA0368
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.ls HEAT repeat                                    130.1    5.9e-36  12
PF02985.12.fs HEAT repeat                                    108.3    2.1e-29  13

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   3/12    532   569 ..     1    36 []    19.1    0.015
PF02985.12.ls   7/12    753   789 ..     1    36 []    24.4  0.00037
PF02985.12.ls   9/12    844   881 ..     1    36 []    16.0     0.13
PF02985.12.ls  10/12    991  1027 ..     1    36 []    19.6     0.01
PF02985.12.ls  11/12   1118  1154 ..     1    36 []    11.8      1.4

Alignments of top-scoring domains:
PF02985.12.ls: domain 3 of 12, from 532 to 569: score 19.1, E = 0.015
                   *->e.ildellplll.kllnDpdpeVReaAaeaLgalaevl<-*
                      +++++ +l+++l+k++ +p+p+VR+aA+  L +l+++l   
    KIAA0368   532    NdVVPWVLDVILnKHIISPNPHVRQAACIWLLSLVRKL    569  

PF02985.12.ls: domain 7 of 12, from 753 to 789: score 24.4, E = 0.00037
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++l+e+l+ l+k l+++ ++VRe+++ aL +l++     
    KIAA0368   753    DkYLKEILQDLVKNLTSNMWRVRESSCLALNDLLRGR    789  

PF02985.12.ls: domain 9 of 12, from 844 to 881: score 16.0, E = 0.13
                   *->e.ildellplll.kllnDpdpeVReaAaeaLgalaevl<-*
                      ++++  llp+ll+k++ +++ eVR+ ++++L+++++ +   
    KIAA0368   844    QrTIAALLPCLLdKGMMSTVTEVRALSINTLVKISKSA    881  

PF02985.12.ls: domain 10 of 12, from 991 to 1027: score 19.6, E = 0.01
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++  +l+ +ll++l+D ++ +++++a+a+g l++     
    KIAA0368   991    TpYSGKLMSALLSGLTDRNSVIQKSCAFAMGHLVRTS    1027 

PF02985.12.ls: domain 11 of 12, from 1118 to 1154: score 11.8, E = 1.4
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      + +l+el+ + +k+l++++++ +++ a a++++a++    
    KIAA0368  1118    RlYLQELITITQKALQSQSWKMKAQGAIAMASIAKQT    1154 

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