hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01245916/chunk_1/iprscan-20080502-01245916.nocrc
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Query sequence: KIAA0382
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF09128.1.fs Regulator of G protein signalling-like domai   424.7   1.6e-139   1
PF09128.1.ls Regulator of G protein signalling-like domai   426.4   3.5e-125   1
PF00621.11.fs RhoGEF domain                                   78.6      5e-23   2
PF00621.11.ls RhoGEF domain                                   75.0    2.2e-19   1
PF00595.14.fs PDZ domain (Also known as DHR or GLGF)          27.2    5.5e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00595.14.fs   1/1       1    44 [.    40    86 .]    27.2  5.5e-07
PF09128.1.fs   1/1     267   457 ..     1   239 []   424.7 1.6e-139
PF09128.1.ls   1/1     267   457 ..     1   239 []   426.4 3.5e-125
PF00621.11.ls   1/1     690   875 ..     1   207 []    75.0  2.2e-19
PF00621.11.fs   1/2     690   741 ..     1    57 [.    43.3  1.4e-12
PF00621.11.fs   2/2     786   875 ..   107   207 .]    35.3  3.3e-10

Alignments of top-scoring domains:
PF00595.14.fs: domain 1 of 1, from 1 to 44: score 27.2, E = 5.5e-07
                   *->aAeagGrLqaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl
                      aA ++G  q GD+I++vNG+ ++   h+e+v+++k+ +   v+Ltv+
    KIAA0382     1    AAMRAG-VQTGDRIIKVNGTLVTHSNHLEVVKLIKSGS--YVALTVQ 44   

                   <-*
                      
    KIAA0382     -     -    

PF09128.1.fs: domain 1 of 1, from 267 to 457: score 424.7, E = 1.6e-139
                   *->qcspFqslelLLEKsRPAHLAVFLhhVlsQfDPspLLcYLiavDlYk
                      qcs+Fqs+elL  KsRPAHLAVFLhhV+sQfDP++LLcYL++ DlYk
    KIAA0382   267    QCSCFQSIELL--KSRPAHLAVFLHHVVSQFDPATLLCYLYS-DLYK 310  

                   qAYgtsKEaRrlfmeihstFLdrnAppLkvpvpeeiaadlGataDGfdfL
                      ++sKE+Rr f+e+h++FLdr+A +Lkv+vp+e +adl          
    KIAA0382   311 H--TNSKETRRIFLEFHQFFLDRSA-HLKVSVPDEMSADL---------- 347  

                   DeCqYYfqidkimcvdrrrpelipeeilRrvlqelqqralpeIqrqLeDe
                                  ++rrpelipe+++R ++q++q+r++pe+qr+LeD 
    KIAA0382   348 ---------------EKRRPELIPEDLHRHYIQTMQERVHPEVQRHLED- 381  

                   vhPPlvCvtWlFRqKRsmGLglaegeldlLdqeldgDrvtlErERqvaEq
                              FRqKRsmGL+lae+el++Ld+e+d+Dr+tlE+ER +aEq
    KIAA0382   382 -----------FRQKRSMGLTLAESELTKLDAERDKDRLTLEKERTCAEQ 420  

                   iLskleeiLDELstssttESCEeksstlqyailTYmkhlGVk<-*
                   i++k+ee+L   +t++++E  E+ksst+qy+il+YmkhlGVk   
    KIAA0382   421 IVAKIEEVL---MTAQAVE--EDKSSTMQYVILMYMKHLGVK    457  

PF09128.1.ls: domain 1 of 1, from 267 to 457: score 426.4, E = 3.5e-125
                   *->qcspFqslelLLEKsRPAHLAVFLhhVlsQfDPspLLcYLiavDlYk
                      qcs+Fqs+elL  KsRPAHLAVFLhhV+sQfDP++LLcYL++ DlYk
    KIAA0382   267    QCSCFQSIELL--KSRPAHLAVFLHHVVSQFDPATLLCYLYS-DLYK 310  

                   qAYgtsKEaRrlfmeihstFLdrnAppLkvpvpeeiaadlGataDGfdfL
                      ++sKE+Rr f+e+h++FLdr+A +Lkv+vp+e +adl          
    KIAA0382   311 H--TNSKETRRIFLEFHQFFLDRSA-HLKVSVPDEMSADL---------- 347  

                   DeCqYYfqidkimcvdrrrpelipeeilRrvlqelqqralpeIqrqLeDe
                                  ++rrpelipe+++R ++q++q+r++pe+qr+LeD 
    KIAA0382   348 ---------------EKRRPELIPEDLHRHYIQTMQERVHPEVQRHLED- 381  

                   vhPPlvCvtWlFRqKRsmGLglaegeldlLdqeldgDrvtlErERqvaEq
                              FRqKRsmGL+lae+el++Ld+e+d+Dr+tlE+ER +aEq
    KIAA0382   382 -----------FRQKRSMGLTLAESELTKLDAERDKDRLTLEKERTCAEQ 420  

                   iLskleeiLDELstssttESCEeksstlqyailTYmkhlGVk<-*
                   i++k+ee+L   +t++++E  E+ksst+qy+il+YmkhlGVk   
    KIAA0382   421 IVAKIEEVL---MTAQAVE--EDKSSTMQYVILMYMKHLGVK    457  

PF00621.11.ls: domain 1 of 1, from 690 to 875: score 75.0, E = 2.2e-19
                   *->vlkElleTEkkYvrdLeildnvymkpLreaaisskplLtpddietiF
                      v++El+ TE++ vr+L  ld+v+ +++ ++      +L+p ++  iF
    KIAA0382   690    VINELFYTERAHVRTLKVLDQVFYQRVSREG-----ILSPSELRKIF 731  

                   sNiediyefhreFLkssLearisssnfedlDekkiepsaqrlGdlF....
                   sN+edi+++h  +    ++a+          +  i+++ + l   F++++
    KIAA0382   732 SNLEDILQLHIGLNE-QMKAVRKRN-----ETSVIDQIGEDLLTWFsgpg 775  

                   .lelkaeflqvYgeYcsnkpyAqelleklrqaasnpqFaefldeveassn
                   +++lk ++    + +csn+p A e++++    ++   F+ f+++ e +++
    KIAA0382   776 eEKLKHAA----ATFCSNQPFALEMIKS--RQKKDSRFQTFVQDAESNPL 819  

                   tgAkddavkltLqsLLlkPvqRilrYpLLLkeLLkhtpegedssesedLk
                   +       +l L + +   +qR+++YpLLL+ + k+t       e+e  k
    KIAA0382   820 CR------RLQLKDIIPTQMQRLTKYPLLLDNIAKYTE---WPTEREKVK 860  

                   kaldalqdlaksiNe<-*
                   ka d  + +++++N+   
    KIAA0382   861 KAADHCRQILNYVNQ    875  

PF00621.11.fs: domain 1 of 2, from 690 to 741: score 43.3, E = 1.4e-12
                   *->vlkElleTEkkYvrdLeildnvymkpLreaaisskplLtpddietiF
                      v++El+ TE++ vr+L  ld+v+ +++ ++      +L+p ++  iF
    KIAA0382   690    VINELFYTERAHVRTLKVLDQVFYQRVSREG-----ILSPSELRKIF 731  

                   sNiediyefh<-*
                   sN+edi+++h   
    KIAA0382   732 SNLEDILQLH    741  

PF00621.11.fs: domain 2 of 2, from 786 to 875: score 35.3, E = 3.3e-10
                   *->YcsnkpyAqelleklrqaasnpqFaefldeveassntgAkddavklt
                      +csn+p A e++++    ++   F+ f+++ e ++++       +l 
    KIAA0382   786    FCSNQPFALEMIKS--RQKKDSRFQTFVQDAESNPLCR------RLQ 824  

                   LqsLLlkPvqRilrYpLLLkeLLkhtpegedssesedLkkaldalqdlak
                   L + +   +qR+++YpLLL+ + k+t       e+e  kka d  + +++
    KIAA0382   825 LKDIIPTQMQRLTKYPLLLDNIAKYTE---WPTEREKVKKAADHCRQILN 871  

                   siNe<-*
                   ++N+   
    KIAA0382   872 YVNQ    875  

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