hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01332848/chunk_1/iprscan-20080502-01332848.nocrc
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Query sequence: KIAA0387
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00102.17.ls Protein-tyrosine phosphatase              388.8   7.8e-114   1
PF00102.17.fs Protein-tyrosine phosphatase              387.0   2.7e-113   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00102.17.fs   1/1     797  1031 ..     1   275 []   387.0 2.7e-113
PF00102.17.ls   1/1     797  1031 ..     1   275 []   388.8 7.8e-114

Alignments of top-scoring domains:
PF00102.17.fs: domain 1 of 1, from 797 to 1031: score 387.0, E = 2.7e-113
                   *->NkeKNRykdilpyDhtRVkLkpipgdedsDYINAsyidgpivrllvv
                      N +KNR+  +l yDh+RV Lk ++++ +sDYINAs i+ +       
    KIAA0387   797    NVPKNRSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDH------- 836  

                   ykkpkayIaTQgPlpnTieDFWrMvweqkvtvIVMLtelvEkgrsseKtC
                   ++++ ayIaTQgPlp T++DFW+Mvwe ++ vIVMLt l E+g   ++ C
    KIAA0387   837 DPRNPAYIATQGPLPATVADFWQMVWESGCVVIVMLTPLAENGV--RQ-C 883  

                   aqYWPeeskeggsltyGditVtlvseek.eadytvRtleltn.gdgskin
                   ++YWP+    +gs  y  ++V+lvse+  ++d+ vR + l+n ++     
    KIAA0387   884 YHYWPD----EGSNLYHIYEVNLVSEHIwCEDFLVRSFYLKNlQT----- 924  

                   akqekkgetrtVthfhytgWPDhgvPesgpkslldllrkvrksqpsnvel
                         +etrtVt+fh+++W D+gvP+s ++slld++rkv+k+++     
    KIAA0387   925 ------NETRTVTQFHFLSWYDRGVPSS-SRSLLDFRRKVNKCYR----- 962  

                   gerspdsgprSystaPivVHCSAGvGRTGtfiaidillqqleaegevidv
                       ++s+       Pi+VHCS+G+GR+Gt+++id++l+++ ++ + id+
    KIAA0387   963 ----GRSC-------PIIVHCSDGAGRSGTYVLIDMVLNKMAKGAKEIDI 1001 

                   fdiVkelRsqRpgmVQteeQYiFlydaile<-*
                     ++++lR qRpgmVQt eQ++F   a++e   
    KIAA0387  1002 AATLEHLRDQRPGMVQTKEQFEFALTAVAE    1031 

PF00102.17.ls: domain 1 of 1, from 797 to 1031: score 388.8, E = 7.8e-114
                   *->NkeKNRykdilpyDhtRVkLkpipgdedsDYINAsyidgpivrllvv
                      N +KNR+  +l yDh+RV Lk ++++ +sDYINAs i+ +       
    KIAA0387   797    NVPKNRSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDH------- 836  

                   ykkpkayIaTQgPlpnTieDFWrMvweqkvtvIVMLtelvEkgrsseKtC
                   ++++ ayIaTQgPlp T++DFW+Mvwe ++ vIVMLt l E+g   ++ C
    KIAA0387   837 DPRNPAYIATQGPLPATVADFWQMVWESGCVVIVMLTPLAENGV--RQ-C 883  

                   aqYWPeeskeggsltyGditVtlvseek.eadytvRtleltn.gdgskin
                   ++YWP+    +gs  y  ++V+lvse+  ++d+ vR + l+n ++     
    KIAA0387   884 YHYWPD----EGSNLYHIYEVNLVSEHIwCEDFLVRSFYLKNlQT----- 924  

                   akqekkgetrtVthfhytgWPDhgvPesgpkslldllrkvrksqpsnvel
                         +etrtVt+fh+++W D+gvP+s ++slld++rkv+k+++     
    KIAA0387   925 ------NETRTVTQFHFLSWYDRGVPSS-SRSLLDFRRKVNKCYR----- 962  

                   gerspdsgprSystaPivVHCSAGvGRTGtfiaidillqqleaegevidv
                       ++s+       Pi+VHCS+G+GR+Gt+++id++l+++ ++ + id+
    KIAA0387   963 ----GRSC-------PIIVHCSDGAGRSGTYVLIDMVLNKMAKGAKEIDI 1001 

                   fdiVkelRsqRpgmVQteeQYiFlydaile<-*
                     ++++lR qRpgmVQt eQ++F   a++e   
    KIAA0387  1002 AATLEHLRDQRPGMVQTKEQFEFALTAVAE    1031 

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