hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01332848/chunk_1/iprscan-20080502-01332848.nocrc
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Query sequence: KIAA0387
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00194                                                 407.8   5.9e-118   1
SM00404                                                 147.4    1.5e-39   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00194    1/1     771  1034 ..     1   308 []   407.8 5.9e-118
SM00404    1/1     929  1031 ..     1    92 []   147.4  1.5e-39

Alignments of top-scoring domains:
SM00194: domain 1 of 1, from 771 to 1034: score 407.8, E = 5.9e-118
                   *->gleeEferlqrltpddllsnfltdesctvanlpeNreseKNRYkcdi
                       le+E+e l++++ +++        s  va+++eN+   KNR+   +
    KIAA0387   771    RLEKEWEALCAYQAEPN--------SSFVAQREENV--PKNRSL-AV 806  

                   lpyDhtRVkLkppdgesdseegsDYINAnyidgy.kepkayIaTQGPLps
                   l yDh+RV Lk ++++    ++sDYINA+ i+ +++++ ayIaTQGPLp 
    KIAA0387   807 LTYDHSRVLLKAENSH----SHSDYINASPIMDHdPRNPAYIATQGPLPA 852  

                   TveDFWrMVweqkvpvIVMLtnlvEkkterrkeggreKCaqYWPee.slt
                   Tv+DFW+MVwe ++ vIVMLt l E+        g++ C +YWP+e+s  
    KIAA0387   853 TVADFWQMVWESGCVVIVMLTPLAEN--------GVRQCYHYWPDEgSNL 894  

                   yGditVtlvseeklpddytiRtlevtntgtekkdlkaksetrtVthyhyt
                   y+ ++V+lvse+++++d+ +R ++++n +t        +etrtVt++h+ 
    KIAA0387   895 YHIYEVNLVSEHIWCEDFLVRSFYLKNLQT--------NETRTVTQFHFL 936  

                   nWPDhgvPespkslldfvrlvrksqssspnssenivssnskyagtspsgP
                   +W D+gvP+s++slldf+r+v+k+++ +                   s P
    KIAA0387   937 SWYDRGVPSSSRSLLDFRRKVNKCYRGR-------------------SCP 967  

                   ivVHCSAGvGRTGTFiaidillqqlea....vdifdiVkelRsqRpgmVQ
                   i+VHCS+G+GR+GT+++id++l+++ ++ +++di  ++ +lR+qRpgmVQ
    KIAA0387   968 IIVHCSDGAGRSGTYVLIDMVLNKMAKgakeIDIAATLEHLRDQRPGMVQ 1017 

                   TeeQYiFlyraileylk<-*
                   T+eQ+ F   a++e +    
    KIAA0387  1018 TKEQFEFALTAVAEEVN    1034 

SM00404: domain 1 of 1, from 929 to 1031: score 147.4, E = 1.5e-39
                   *->tvkhyhytgWpDhvekdsgvPe..dsileflravrk.......PivV
                      tv+++h+++W D      gvP+++ s+l+f+r+v+k  ++++ Pi+V
    KIAA0387   929    TVTQFHFLSWYDR-----GVPSssRSLLDFRRKVNKcyrgrscPIIV 970  

                   HCSAGvGRTGtfvaidillqq.......vdifdtvkelRsqRpgmvqtee
                   HCS+G+GR+Gt+v+id++l++  ++ +++di  t+++lR+qRpgmvqt+e
    KIAA0387   971 HCSDGAGRSGTYVLIDMVLNKmakgakeIDIAATLEHLRDQRPGMVQTKE 1020 

                   QYlFlyralle<-*
                   Q+ F   a++e   
    KIAA0387  1021 QFEFALTAVAE    1031 

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