hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01432570/chunk_1/iprscan-20080502-01432570.nocrc
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Query sequence: KIAA0393
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
PF06701.4.fs Mib_herc2                                     144.8    4.1e-42   1
PF06701.4.ls Mib_herc2                                     146.7    5.6e-41   1
PF00173.18.fs Cytochrome b5-like Heme/Steroid binding dom    60.4    6.5e-16   1
PF00173.18.ls Cytochrome b5-like Heme/Steroid binding dom    62.3    1.5e-15   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
PF00173.18.fs   1/1      17    91 ..     1    81 []    60.4  6.5e-16
PF00173.18.ls   1/1      17    91 ..     1    81 []    62.3  1.5e-15
PF06701.4.fs   1/1     679   741 ..     1    69 []   144.8  4.1e-42
PF06701.4.ls   1/1     679   741 ..     1    69 []   146.7  5.6e-41

Alignments of top-scoring domains:
PF00173.18.fs: domain 1 of 1, from 17 to 91: score 60.4, E = 6.5e-16
                   *->yftleelkehdGkkdgrilvainGkVYDlsrflkfhPgGqsallafa
                       ++ ++l++h+  +dg ++ +i+GkVYD+ +f+ ++ + +s l +fa
    KIAA0393    17    FVRIADLENHN--NDGGFWTVIDGKVYDIKDFQTQSLTENSILAQFA 61   

                   GrDaTraFaaklaahseeaaeellekyykvGrld<-*
                   G+D  +a+   +aa+++e+ +e ++  ++vG +    
    KIAA0393    62 GEDPVVAL---EAALQFEDTRESMHA-FCVGQYL    91   

PF00173.18.ls: domain 1 of 1, from 17 to 91: score 62.3, E = 1.5e-15
                   *->yftleelkehdGkkdgrilvainGkVYDlsrflkfhPgGqsallafa
                       ++ ++l++h+  +dg ++ +i+GkVYD+ +f+ ++ + +s l +fa
    KIAA0393    17    FVRIADLENHN--NDGGFWTVIDGKVYDIKDFQTQSLTENSILAQFA 61   

                   GrDaTraFaaklaahseeaaeellekyykvGrld<-*
                   G+D  +a+   +aa+++e+ +e ++  ++vG +    
    KIAA0393    62 GEDPVVAL---EAALQFEDTRESMHA-FCVGQYL    91   

PF06701.4.fs: domain 1 of 1, from 679 to 741: score 144.8, E = 4.1e-42
                   *->GaRVVRGvDWkWgdQDGGeGgvGtVieigrwgstespdgwvvVqWDt
                      G+RV+RGvDWkWgdQDG+++g G+Vi++       ++dgw++VqWDt
    KIAA0393   679    GTRVMRGVDWKWGDQDGPPPGLGRVIGE------LGEDGWIRVQWDT 719  

                   GsrNsYRmGyeGkyDLklvdsa<-*
                   Gs+NsYRmG+eGkyDLkl++ +   
    KIAA0393   720 GSTNSYRMGKEGKYDLKLAELP    741  

PF06701.4.ls: domain 1 of 1, from 679 to 741: score 146.7, E = 5.6e-41
                   *->GaRVVRGvDWkWgdQDGGeGgvGtVieigrwgstespdgwvvVqWDt
                      G+RV+RGvDWkWgdQDG+++g G+Vi++       ++dgw++VqWDt
    KIAA0393   679    GTRVMRGVDWKWGDQDGPPPGLGRVIGE------LGEDGWIRVQWDT 719  

                   GsrNsYRmGyeGkyDLklvdsa<-*
                   Gs+NsYRmG+eGkyDLkl++ +   
    KIAA0393   720 GSTNSYRMGKEGKYDLKLAELP    741  

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