# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg01499.fasta.nr -Q ../query/KIAA0409.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0409, 464 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7823066 sequences Expectation_n fit: rho(ln(x))= 5.6698+/-0.000195; mu= 9.9854+/- 0.011 mean_var=101.4747+/-19.407, 0's: 37 Z-trim: 49 B-trim: 69 in 1/65 Lambda= 0.127320 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|109107525|ref|XP_001100895.1| PREDICTED: simila ( 484) 2921 546.9 4.2e-153 gi|73988744|ref|XP_534039.2| PREDICTED: similar to ( 602) 2474 464.9 2.5e-128 gi|74182507|dbj|BAE42874.1| unnamed protein produc ( 457) 2297 432.2 1.3e-118 gi|74213042|dbj|BAE41665.1| unnamed protein produc ( 457) 2292 431.3 2.4e-118 gi|62900376|sp|Q9DB85.1|HUCE1_MOUSE RecName: Full= ( 457) 2274 428.0 2.4e-117 gi|74191866|dbj|BAE32883.1| unnamed protein produc ( 457) 2257 424.9 2.1e-116 gi|62900115|sp|Q5U4F0.1|HUCE1_RAT RecName: Full=Ce ( 457) 2227 419.4 9.4e-115 gi|26346719|dbj|BAC37008.1| unnamed protein produc ( 451) 2176 410.0 6.2e-112 gi|74178549|dbj|BAE32523.1| unnamed protein produc ( 503) 2175 409.9 7.6e-112 gi|148684858|gb|EDL16805.1| RIKEN cDNA 1500003O22, ( 428) 2159 406.9 5.2e-111 gi|215794559|pdb|2ZFU|A Chain A, Structure Of The ( 215) 1450 276.4 5e-72 gi|149068460|gb|EDM18012.1| similar to RIKEN cDNA ( 215) 1364 260.6 2.9e-67 gi|126330310|ref|XP_001380334.1| PREDICTED: hypoth ( 399) 1332 254.9 2.6e-65 gi|210125799|gb|EEA73489.1| hypothetical protein B ( 307) 956 185.8 1.3e-44 gi|169146294|emb|CAQ14469.1| novel protein [Danio ( 533) 931 181.4 4.8e-43 gi|125837348|ref|XP_001334686.1| PREDICTED: wu:fk3 ( 533) 927 180.7 8e-43 gi|210111944|gb|EEA59732.1| hypothetical protein B ( 595) 915 178.5 4e-42 gi|189234953|ref|XP_973099.2| PREDICTED: similar t ( 243) 839 164.2 3.4e-38 gi|167866551|gb|EDS29934.1| cerebral protein 1 [Cu ( 340) 793 155.9 1.5e-35 gi|108877533|gb|EAT41758.1| conserved hypothetical ( 327) 780 153.5 7.6e-35 gi|156554950|ref|XP_001602092.1| PREDICTED: simila ( 354) 780 153.5 8e-35 gi|157019556|gb|EAA05263.3| AGAP011327-PA [Anophel ( 356) 773 152.2 2e-34 gi|194157605|gb|EDW72506.1| GK20668 [Drosophila wi ( 361) 767 151.1 4.3e-34 gi|110757362|ref|XP_001120291.1| PREDICTED: simila ( 230) 763 150.2 5.1e-34 gi|193910795|gb|EDW09662.1| GI18917 [Drosophila mo ( 357) 749 147.8 4.2e-33 gi|13775469|gb|AAK39280.1| Hypothetical protein T0 ( 343) 746 147.2 6e-33 gi|156220875|gb|EDO41737.1| predicted protein [Nem ( 218) 738 145.6 1.2e-32 gi|212510977|gb|EEB14057.1| Cerebral protein, puta ( 219) 738 145.6 1.2e-32 gi|157345392|emb|CAO14690.1| unnamed protein produ ( 263) 731 144.4 3.3e-32 gi|195638192|gb|ACG38564.1| cerebral protein 1 [Ze ( 291) 727 143.7 6e-32 gi|190621607|gb|EDV37131.1| GF11578 [Drosophila an ( 360) 728 143.9 6.1e-32 gi|147767094|emb|CAN65396.1| hypothetical protein ( 237) 724 143.0 7.5e-32 gi|190657967|gb|EDV55180.1| GG21952 [Drosophila er ( 359) 718 142.1 2.2e-31 gi|27754615|gb|AAO22753.1| unknown protein [Arabid ( 287) 713 141.1 3.5e-31 gi|194156247|gb|EDW71431.1| GJ19772 [Drosophila vi ( 356) 713 141.2 4.1e-31 gi|193899525|gb|EDV98391.1| GH23091 [Drosophila gr ( 346) 710 140.6 5.9e-31 gi|194114101|gb|EDW36144.1| GL17637 [Drosophila pe ( 354) 710 140.6 6e-31 gi|113536834|dbj|BAF09217.1| Os02g0593900 [Oryza s ( 292) 708 140.2 6.7e-31 gi|194126521|gb|EDW48564.1| GM21938 [Drosophila se ( 356) 709 140.4 6.8e-31 gi|194177918|gb|EDW91529.1| GE12025 [Drosophila ya ( 360) 709 140.4 6.9e-31 gi|198136440|gb|EAL25716.2| GA20128 [Drosophila ps ( 354) 707 140.1 8.8e-31 gi|222845806|gb|EEE83353.1| predicted protein [Pop ( 220) 702 139.0 1.2e-30 gi|187028525|emb|CAP32280.1| Hypothetical protein ( 332) 698 138.4 2.6e-30 gi|7302510|gb|AAF57594.1| CG7137 [Drosophila melan ( 358) 697 138.2 3.2e-30 gi|194194206|gb|EDX07782.1| GD11435 [Drosophila si ( 356) 696 138.1 3.6e-30 gi|158593460|gb|EDP32055.1| Probable nucleolar GTP ( 950) 700 139.2 4.4e-30 gi|190587157|gb|EDV27210.1| hypothetical protein T ( 251) 684 135.7 1.3e-29 gi|193587350|ref|XP_001952157.1| PREDICTED: simila ( 333) 685 136.0 1.4e-29 gi|198412750|ref|XP_002119274.1| PREDICTED: simila ( 366) 685 136.0 1.5e-29 gi|221109508|ref|XP_002169537.1| PREDICTED: simila ( 196) 680 134.9 1.8e-29 >>gi|109107525|ref|XP_001100895.1| PREDICTED: similar to (484 aa) initn: 2921 init1: 2921 opt: 2921 Z-score: 2905.0 bits: 546.9 E(): 4.2e-153 Smith-Waterman score: 2921; 93.521% identity (96.544% similar) in 463 aa overlap (2-464:22-484) 10 20 30 40 KIAA04 GDPALPTLMFEEPEWAEAAPVAAGLGPVISRPPPAASSQN :::: .::::::::: :::::::::::::::::::. :: gi|109 MSETLRLPEKSSARGEDRGLRDPALRSLMFEEPEWASAAPVAAGLGPVISRPPPAAALQN 10 20 30 40 50 60 50 60 70 80 90 100 KIAA04 KGSKRRQLLATLRALEAASLSQHPPSLCISDSEEEEEERKKKCPKKASFASASAEVGKKG :::: :::::::::::::::::::::: :::::.:::::::::.::::::::.:::::: gi|109 KGSKCRQLLATLRALEAASLSQHPPSLPSSDSEEDEEERKKKCPQKASFASASVEVGKKG 70 80 90 100 110 120 110 120 130 140 150 160 KIAA04 KKKCQKQGPPCSDSEEEVERKKKCHKQALVGSDSAEDEKRKRKCQKHAPINSAQHLDNVD .:::.::::::::::::::::::::::::::::::: ::::::::::::::::::::.:: gi|109 RKKCEKQGPPCSDSEEEVERKKKCHKQALVGSDSAEKEKRKRKCQKHAPINSAQHLDGVD 130 140 150 160 170 180 170 180 190 200 210 220 KIAA04 QTGPKAWKGSTTNDPPKQSPGSTSPKPPHTLSRKQWRNRQKNKRRCKNKFQPPQVPDQAP :::::::::::::::::::::: :::::.:::::::::::::::: ::::.::::: ::: gi|109 QTGPKAWKGSTTNDPPKQSPGSISPKPPRTLSRKQWRNRQKNKRRHKNKFRPPQVPGQAP 190 200 210 220 230 240 230 240 250 260 270 280 KIAA04 AEAPTEKTEVSPVPRTDSHEARAGALRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQE :::::::::: : :::::::::. ::::::::::::::::::::::::::::::::::: gi|109 AEAPTEKTEVPAVSRTDSHEARAADLRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQE 250 260 270 280 290 300 290 300 310 320 330 340 KIAA04 DPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHC ::::::.:::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|109 DPEAFLVYHRGFQSQVKKWPLQPVDGIARDLRQRPASLVVADFGCGDCRLASSIRNPVHC 310 320 330 340 350 360 350 360 370 380 390 400 KIAA04 FDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAE 370 380 390 400 410 420 410 420 430 440 450 460 KIAA04 VSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCL ::::::::::::::::::::::::::::::::::::::::::: ::::::::::.:.::: gi|109 VSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGPPQVGPKAQLSGLKLHPCL 430 440 450 460 470 480 KIAA04 YKRR :::: gi|109 YKRR >>gi|73988744|ref|XP_534039.2| PREDICTED: similar to T07 (602 aa) initn: 1859 init1: 1859 opt: 2474 Z-score: 2460.0 bits: 464.9 E(): 2.5e-128 Smith-Waterman score: 2474; 81.304% identity (90.652% similar) in 460 aa overlap (6-464:146-602) 10 20 30 KIAA04 GDPALPTLMFEEPEWAEAAPVAAGLGPVISRPPPA :: ::::::::. ::...:. :: ::::: gi|739 SGAVPAVRALRGLETRPARAEACGPRGLPHPTRMFEEPEWADEAPAGTGFRPVAPRPPPA 120 130 140 150 160 170 40 50 60 70 80 90 KIAA04 ASSQNKGSKRRQLLATLRALEAASLSQHPPSLCISDSEEEEEERKKKCPKKASFASASAE :.:: ::::.::::::::::::::: :.:::: :::::. ::::: ::::: ::.: : gi|739 AASQIKGSKHRQLLATLRALEAASLPQQPPSLPSSDSEEDVVERKKKRPKKASSASTSIE 180 190 200 210 220 230 100 110 120 130 140 150 KIAA04 VGKKGKKKCQKQGPPCSDSEE-EVERKKKCHKQALVGSDSAEDEKRKRKCQKHAPINSAQ : : .:.::::::: :. :: :::::::: : .. ..:::...:::.::::..: . .: gi|739 VKK--RKRCQKQGPPGSEYEEKEVERKKKCLKGVFNANDSAKEQKRKKKCQKQVPSSPTQ 240 250 260 270 280 290 160 170 180 190 200 210 KIAA04 HLDNVDQTGPKAWKGSTTNDPPKQSPGSTSPKPPHTLSRKQWRNRQKNKRRCKNKFQPPQ :::. .::::::::.:::.: : :::.:: .::.:::::::::::::::: ::::.::: gi|739 HLDDDNQTGPKAWKSSTTSDLSKPSPGTTS-NPPQTLSRKQWRNRQKNKRRHKNKFRPPQ 300 310 320 330 340 350 220 230 240 250 260 270 KIAA04 VPDQAPAEAPTEKTEVSPVPRTDSHEARAGALRARMAQRLDGARFRYLNEQLYSGPSSAA ::::: ::::..:. :.: :.:: ::::::::::::::::::::::::::: ::::: gi|739 PLDQAPATAPTEEAEMPPAPSPDNHEDRAGALRARMAQRLDGARFRYLNEQLYSKPSSAA 360 370 380 390 400 410 280 290 300 310 320 330 KIAA04 QRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSI 420 430 440 450 460 470 340 350 360 370 380 390 KIAA04 RNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGG :: :::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|739 RNTVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKQGG 480 490 500 510 520 530 400 410 420 430 440 450 KIAA04 LLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGL :::::::::::::::::: ::::::::..::::::::::::::.::::: :::::::.:: gi|739 LLKVAEVSSRFEDVRTFLGAVTKLGFKVISKDLTNSHFFLFDFEKTGPPRVGPKAQLTGL 540 550 560 570 580 590 460 KIAA04 QLQPCLYKRR .::::::::: gi|739 KLQPCLYKRR 600 >>gi|74182507|dbj|BAE42874.1| unnamed protein product [M (457 aa) initn: 2022 init1: 2022 opt: 2297 Z-score: 2285.9 bits: 432.2 E(): 1.3e-118 Smith-Waterman score: 2297; 76.638% identity (88.210% similar) in 458 aa overlap (9-464:1-457) 10 20 30 40 50 60 KIAA04 GDPALPTLMFEEPEWAEAAPVAAGLGPVISRPPPAASSQNKGSKRRQLLATLRALEAASL :::::::.::::. .::: . .. ::.. :: :::.::::::::::::: gi|741 MFEEPEWVEAAPAIVGLGAATAQVRPATARPVKGRKRRHLLATLRALEAASL 10 20 30 40 50 70 80 90 100 110 KIAA04 SQHPPSLCISDSEEEEEE-RKKKCPKKASFASASAEVGKKGKKKCQKQGPPCSDSEEEVE ::. ::: :::::::: :::. .. :.::.: ::::: : :::::.: :::: . : gi|741 SQQTPSLPGSDSEEEEEVGRKKRHLQRPSLASVSKEVGKKRKGKCQKQAPSISDSEGK-E 60 70 80 90 100 110 120 130 140 150 160 170 KIAA04 RKKKCHKQAL-VGSDSAEDEKRKRKCQKHAPINSAQHLDNVDQTGPKAWKGSTTNDPPKQ ..:::.:: .:. :: .:: :::::... .. .: ::::::: .. ...: :: : gi|741 IRRKCHRQAPPLGGVSAGEEKGKRKCQEYSSLHLTQPLDNVDQTVHNSRTSTATIDPSKP 120 130 140 150 160 170 180 190 200 210 220 230 KIAA04 SPGSTSPKPPHTLSRKQWRNRQKNKRRCKNKFQPPQVPDQAPAEAPTEKTEVSPVPRTDS :: : ::. ::::::::::::::::: ::::.: :.:.::: .: :.::: :::..:: gi|741 SPESMSPNSSHTLSRKQWRNRQKNKRRHKNKFRPLQTPEQAPPKASIEETEVPPVPKSDS 180 190 200 210 220 230 240 250 260 270 280 290 KIAA04 HEARAGALRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKK .:.:::::::::.:::::::::::::::::::::::::::::::::::::::::: :::: gi|741 QESRAGALRARMTQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQRQVKK 240 250 260 270 280 290 300 310 320 330 340 350 KIAA04 WPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQV :::.::::::.::::.:::::::::::::::::::.:::::::::::::::::::::::: gi|741 WPLHPVDRIAKDLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQV 300 310 320 330 340 350 360 370 380 390 400 410 KIAA04 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKL :::::::::::::::::::::::::::::::::::::::::::::::::.:::: ::::: gi|741 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDIRTFLGAVTKL 360 370 380 390 400 410 420 430 440 450 460 KIAA04 GFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR ::::. :::::::::::::.::::: ::::::::::.::::::::: gi|741 GFKIIYKDLTNSHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKRR 420 430 440 450 >>gi|74213042|dbj|BAE41665.1| unnamed protein product [M (457 aa) initn: 2017 init1: 2017 opt: 2292 Z-score: 2280.9 bits: 431.3 E(): 2.4e-118 Smith-Waterman score: 2292; 76.419% identity (88.210% similar) in 458 aa overlap (9-464:1-457) 10 20 30 40 50 60 KIAA04 GDPALPTLMFEEPEWAEAAPVAAGLGPVISRPPPAASSQNKGSKRRQLLATLRALEAASL :::::::.::::. .::: . .. ::.. :: :::.::::::::::::: gi|742 MFEEPEWVEAAPAIVGLGAATAQVRPATARPVKGRKRRHLLATLRALEAASL 10 20 30 40 50 70 80 90 100 110 KIAA04 SQHPPSLCISDSEEEEEE-RKKKCPKKASFASASAEVGKKGKKKCQKQGPPCSDSEEEVE ::. ::: :::::::: :::. .. :.::.: ::::: : :::::.: :::: . : gi|742 SQQTPSLPGSDSEEEEEVGRKKRHLQRPSLASVSKEVGKKRKGKCQKQAPSISDSEGK-E 60 70 80 90 100 110 120 130 140 150 160 170 KIAA04 RKKKCHKQAL-VGSDSAEDEKRKRKCQKHAPINSAQHLDNVDQTGPKAWKGSTTNDPPKQ ..:::.:: .:. :: .:: :::::... .. .: ::::::: .. ...: :: : gi|742 IRRKCHRQAPPLGGVSAGEEKGKRKCQEYSSLHLTQPLDNVDQTVHNSRTSTATIDPSKP 120 130 140 150 160 170 180 190 200 210 220 230 KIAA04 SPGSTSPKPPHTLSRKQWRNRQKNKRRCKNKFQPPQVPDQAPAEAPTEKTEVSPVPRTDS :: : ::. ::::::::::::::::: ::::.: :.:.::: .: :.::: :::..:: gi|742 SPESMSPNSSHTLSRKQWRNRQKNKRRHKNKFRPLQTPEQAPPKASIEETEVPPVPKSDS 180 190 200 210 220 230 240 250 260 270 280 290 KIAA04 HEARAGALRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKK .:.:::::::::.:::::::::::::::::::::::::::::::::::::::::: :::: gi|742 QESRAGALRARMTQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQRQVKK 240 250 260 270 280 290 300 310 320 330 340 350 KIAA04 WPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQV :::.::::::.::::.:::::::::::::::::::.:::::::::::::::::::::::: gi|742 WPLHPVDRIAKDLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQV 300 310 320 330 340 350 360 370 380 390 400 410 KIAA04 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKL ::::::::::::::::::::::::::::::::::::::::::.::::::.:::: ::::: gi|742 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEASSRFEDIRTFLGAVTKL 360 370 380 390 400 410 420 430 440 450 460 KIAA04 GFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR ::::. :::::::::::::.::::: ::::::::::.::::::::: gi|742 GFKIIYKDLTNSHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKRR 420 430 440 450 >>gi|62900376|sp|Q9DB85.1|HUCE1_MOUSE RecName: Full=Cere (457 aa) initn: 1999 init1: 1999 opt: 2274 Z-score: 2263.0 bits: 428.0 E(): 2.4e-117 Smith-Waterman score: 2274; 75.983% identity (87.991% similar) in 458 aa overlap (9-464:1-457) 10 20 30 40 50 60 KIAA04 GDPALPTLMFEEPEWAEAAPVAAGLGPVISRPPPAASSQNKGSKRRQLLATLRALEAASL :::::::.::::. .::: . .. ::.. :: :::.::::::::::::: gi|629 MFEEPEWVEAAPAIVGLGAATAQVRPATAPPVKGRKRRHLLATLRALEAASL 10 20 30 40 50 70 80 90 100 110 KIAA04 SQHPPSLCISDSEEEEEE-RKKKCPKKASFASASAEVGKKGKKKCQKQGPPCSDSEEEVE ::. ::: :::::::: :::. .. :.::.: ::::: : :::::.: :::: . : gi|629 SQQTPSLPGSDSEEEEEVGRKKRHLQRPSLASVSKEVGKKRKGKCQKQAPSISDSEGK-E 60 70 80 90 100 110 120 130 140 150 160 170 KIAA04 RKKKCHKQAL-VGSDSAEDEKRKRKCQKHAPINSAQHLDNVDQTGPKAWKGSTTNDPPKQ ..:::.:: .:. :: .:: :::::... .. .: ::.:::: .. ...: :: : gi|629 IRRKCHRQAPPLGGVSAGEEKGKRKCQEYSSLHLTQPLDSVDQTVHNSRTSTATIDPSKP 120 130 140 150 160 170 180 190 200 210 220 230 KIAA04 SPGSTSPKPPHTLSRKQWRNRQKNKRRCKNKFQPPQVPDQAPAEAPTEKTEVSPVPRTDS :: : ::. ::::::::::::::::: ::::.: :.:.::: .: :.::: :::..:: gi|629 SPESMSPNSSHTLSRKQWRNRQKNKRRHKNKFRPLQTPEQAPPKASIEETEVPPVPKSDS 180 190 200 210 220 230 240 250 260 270 280 290 KIAA04 HEARAGALRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKK .:.:::::::::.:::::::::::::::::::::::.:::::::::::::::::: :::: gi|629 QESRAGALRARMTQRLDGARFRYLNEQLYSGPSSAARRLFQEDPEAFLLYHRGFQRQVKK 240 250 260 270 280 290 300 310 320 330 340 350 KIAA04 WPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQV :::.::::::.::::.:::::::::::::::::::.:::::::::::::::::::::::: gi|629 WPLHPVDRIAKDLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQV 300 310 320 330 340 350 360 370 380 390 400 410 KIAA04 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKL ::::::::::::::::::::::::::::::::: :::::::::::::::.:::: ::::: gi|629 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKTGGLLKVAEVSSRFEDIRTFLGAVTKL 360 370 380 390 400 410 420 430 440 450 460 KIAA04 GFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR ::::. :::::::::::::.::::: ::::::::::.::::::::: gi|629 GFKIIYKDLTNSHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKRR 420 430 440 450 >>gi|74191866|dbj|BAE32883.1| unnamed protein product [M (457 aa) initn: 1982 init1: 1982 opt: 2257 Z-score: 2246.2 bits: 424.9 E(): 2.1e-116 Smith-Waterman score: 2257; 75.546% identity (87.773% similar) in 458 aa overlap (9-464:1-457) 10 20 30 40 50 60 KIAA04 GDPALPTLMFEEPEWAEAAPVAAGLGPVISRPPPAASSQNKGSKRRQLLATLRALEAASL :::::::.::::. .::: . .. ::.. :: :::.::::::::::::: gi|741 MFEEPEWVEAAPAIVGLGAATAQVRPATAPPVKGRKRRHLLATLRALEAASL 10 20 30 40 50 70 80 90 100 110 KIAA04 SQHPPSLCISDSEEEEEE-RKKKCPKKASFASASAEVGKKGKKKCQKQGPPCSDSEEEVE ::. ::: :::::::: :::. .. :.::.: ::::: : :::::.: :::: . : gi|741 SQQTPSLPGSDSEEEEEVGRKKRHLQRPSLASVSKEVGKKRKGKCQKQAPSISDSEGK-E 60 70 80 90 100 110 120 130 140 150 160 170 KIAA04 RKKKCHKQAL-VGSDSAEDEKRKRKCQKHAPINSAQHLDNVDQTGPKAWKGSTTNDPPKQ ..:::.:: .:. :: .:: :::::... .. .: ::.:::: .. ...: :: : gi|741 IRRKCHRQAPPLGGVSAGEEKGKRKCQEYSSLHLTQPLDSVDQTVHNSRTSTATIDPSKP 120 130 140 150 160 170 180 190 200 210 220 230 KIAA04 SPGSTSPKPPHTLSRKQWRNRQKNKRRCKNKFQPPQVPDQAPAEAPTEKTEVSPVPRTDS : : ::. ::::::::::::::::: ::::.: :.:.::: .: :.::: :::..:: gi|741 SHESMSPNSSHTLSRKQWRNRQKNKRRHKNKFRPLQTPEQAPPKASIEETEVPPVPKSDS 180 190 200 210 220 230 240 250 260 270 280 290 KIAA04 HEARAGALRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKK .:.:::::::::.:::::::::::::::::::::::.:::::::::::::::::: :::: gi|741 QESRAGALRARMTQRLDGARFRYLNEQLYSGPSSAARRLFQEDPEAFLLYHRGFQRQVKK 240 250 260 270 280 290 300 310 320 330 340 350 KIAA04 WPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQV :::.::::::.::::.:::::::::::::::::::.:::::::::::::::::::::::: gi|741 WPLHPVDRIAKDLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQV 300 310 320 330 340 350 360 370 380 390 400 410 KIAA04 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKL ::::::::::::::::::.:::::::::::::: :::::::::::::::.:::: ::::: gi|741 PLEDESVDVAVFCLSLMGNNIRDFLEEANRVLKTGGLLKVAEVSSRFEDIRTFLGAVTKL 360 370 380 390 400 410 420 430 440 450 460 KIAA04 GFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR ::::. :::::::::::::.::::: ::::::::::.::::::::: gi|741 GFKIIYKDLTNSHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKRR 420 430 440 450 >>gi|62900115|sp|Q5U4F0.1|HUCE1_RAT RecName: Full=Cerebr (457 aa) initn: 2254 init1: 1947 opt: 2227 Z-score: 2216.4 bits: 419.4 E(): 9.4e-115 Smith-Waterman score: 2227; 74.728% identity (88.017% similar) in 459 aa overlap (9-464:1-457) 10 20 30 40 50 60 KIAA04 GDPALPTLMFEEPEWAEAAPVAAGLGPVISRPPPAASSQNKGSKRRQLLATLRALEAASL :::::::.::::. .:: :: .. :.. :: :::.::::::::::::: gi|629 MFEEPEWVEAAPAIVGLRPVTTQVQAATAPPVKGRKRRHLLATLRALEAASL 10 20 30 40 50 70 80 90 100 110 KIAA04 SQHPPSLCISDSEEEEEE-RKKKCPKKASFASASAEVGKKGKKKCQKQGPPCSDSE-EEV ::. ::: :::::::: :::. ...:.:..: ::::: : :::::.: :::: .:: gi|629 SQQCPSLPGSDSEEEEEVGRKKRHFQRSSLANVSKEVGKKRKGKCQKQAPFISDSEGKEV 60 70 80 90 100 110 120 130 140 150 160 170 KIAA04 ERKKKCHKQAL-VGSDSAEDEKRKRKCQKHAPINSAQHLDNVDQTGPKAWKGSTTNDPPK :: ::.:: .:. :: .:: :::::... .. .: :..:::: .. ...: :::: gi|629 ER--TCHRQAPPLGGISAGEEKGKRKCQEYSYLHPTQSLNSVDQTVHNSRTSTATLDPPK 120 130 140 150 160 170 180 190 200 210 220 230 KIAA04 QSPGSTSPKPPHTLSRKQWRNRQKNKRRCKNKFQPPQVPDQAPAEAPTEKTEVSPVPRTD .: :.::. ::::::::::::::::: ::::.: .. ::.: .: :.::: :.:..: gi|629 SSRESASPNSSHTLSRKQWRNRQKNKRRHKNKFRPLETQDQVPLKASIEETEVPPAPKSD 180 190 200 210 220 230 240 250 260 270 280 290 KIAA04 SHEARAGALRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVK :.:.:::::::::.:::::::::::::::::::::::: ::::::::::::::::: ::: gi|629 SQETRAGALRARMTQRLDGARFRYLNEQLYSGPSSAAQCLFQEDPEAFLLYHRGFQRQVK 240 250 260 270 280 290 300 310 320 330 340 350 KIAA04 KWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQ ::::.::::::.::::.:::::::::::::::::::.::::::::::.:::::::::::: gi|629 KWPLHPVDRIAKDLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLAALDPRVTVCDMAQ 300 310 320 330 340 350 360 370 380 390 400 410 KIAA04 VPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTK ::::::::::::::::::::::::::::::::::::::::::::::::::.:::: :::: gi|629 VPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDIRTFLGAVTK 360 370 380 390 400 410 420 430 440 450 460 KIAA04 LGFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR ::::.. :::::::::::::.::::: ::::::::::.:::::::.: gi|629 LGFKVIYKDLTNSHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKHR 420 430 440 450 >>gi|26346719|dbj|BAC37008.1| unnamed protein product [M (451 aa) initn: 1999 init1: 1999 opt: 2176 Z-score: 2165.8 bits: 410.0 E(): 6.2e-112 Smith-Waterman score: 2176; 77.136% identity (88.453% similar) in 433 aa overlap (34-464:20-451) 10 20 30 40 50 60 KIAA04 ALPTLMFEEPEWAEAAPVAAGLGPVISRPPPAASSQNKGSKRRQLLATLRALEAASLSQH ::.. :: :::.:::::::::::::::. gi|263 MGGGGPSHRGPRGRDTQVRPATAPPVKGRKRRHLLATLRALEAASLSQQ 10 20 30 40 70 80 90 100 110 120 KIAA04 PPSLCISDSEEEEEE-RKKKCPKKASFASASAEVGKKGKKKCQKQGPPCSDSEEEVERKK ::: :::::::: :::. .. :.::.: ::::: : :::::.: :::: . : .. gi|263 TPSLPGSDSEEEEEVGRKKRHLQRPSLASVSKEVGKKRKGKCQKQAPSISDSEGK-EIRR 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 KCHKQAL-VGSDSAEDEKRKRKCQKHAPINSAQHLDNVDQTGPKAWKGSTTNDPPKQSPG :::.:: .:. :: .:: :::::... .. .: ::.:::: .. ...: :: : :: gi|263 KCHRQAPPLGGVSAGEEKGKRKCQEYSSLHLTQPLDSVDQTVHNSRTSTATIDPSKPSPE 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 STSPKPPHTLSRKQWRNRQKNKRRCKNKFQPPQVPDQAPAEAPTEKTEVSPVPRTDSHEA : ::. ::::::::::::::::: ::::.: :.:.::: .: :.::: :::..::.:. gi|263 SMSPNSSHTLSRKQWRNRQKNKRRHKNKFRPLQTPEQAPPKASIEETEVPPVPKSDSQES 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 RAGALRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPL :::::::::.:::::::::::::::::::::::.:::::::::::::::::: ::::::: gi|263 RAGALRARMTQRLDGARFRYLNEQLYSGPSSAARRLFQEDPEAFLLYHRGFQRQVKKWPL 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 QPVDRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLE .::::::.::::.:::::::::::::::::::.::::::::::::::::::::::::::: gi|263 HPVDRIAKDLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQVPLE 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 DESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFK :::::::::::::::::::::::::::::: :::::::::::::::.:::: :::::::: gi|263 DESVDVAVFCLSLMGTNIRDFLEEANRVLKTGGLLKVAEVSSRFEDIRTFLGAVTKLGFK 350 360 370 380 390 400 430 440 450 460 KIAA04 IVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR :. :::::::::::::.::::: ::::::::::.::::::::: gi|263 IIYKDLTNSHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKRR 410 420 430 440 450 >>gi|74178549|dbj|BAE32523.1| unnamed protein product [M (503 aa) initn: 2015 init1: 2015 opt: 2175 Z-score: 2164.2 bits: 409.9 E(): 7.6e-112 Smith-Waterman score: 2175; 78.353% identity (89.176% similar) in 425 aa overlap (42-464:80-503) 20 30 40 50 60 70 KIAA04 EPEWAEAAPVAAGLGPVISRPPPAASSQNKGSKRRQLLATLRALEAASLSQHPPSLCISD : :::.:::::::::::::::. ::: :: gi|741 VHSSVPAQRPRDWGSLGGLRENRDKRMTLCGRKRRHLLATLRALEAASLSQQTPSLPGSD 50 60 70 80 90 100 80 90 100 110 120 KIAA04 SEEEEEE-RKKKCPKKASFASASAEVGKKGKKKCQKQGPPCSDSEEEVERKKKCHKQAL- :::::: :::. .. :.::.: ::::: : :::::.: :::: . : ..:::.:: gi|741 SEEEEEVGRKKRHLQRPSLASVSKEVGKKRKGKCQKQAPSISDSEGK-EIRRKCHRQAPP 110 120 130 140 150 160 130 140 150 160 170 180 KIAA04 VGSDSAEDEKRKRKCQKHAPINSAQHLDNVDQTGPKAWKGSTTNDPPKQSPGSTSPKPPH .:. :: .:: :::::... .. .: ::::::: .. ...: :: : :: : ::. : gi|741 LGGVSAGEEKGKRKCQEYSSLHLTQPLDNVDQTVHNSRTSTATIDPSKPSPESMSPNSSH 170 180 190 200 210 220 190 200 210 220 230 240 KIAA04 TLSRKQWRNRQKNKRRCKNKFQPPQVPDQAPAEAPTEKTEVSPVPRTDSHEARAGALRAR :::::::::::::::: ::::.: :.:.::: .: :.::: :::..::.:.:::::::: gi|741 TLSRKQWRNRQKNKRRHKNKFRPLQTPEQAPPKASIEETEVPPVPKSDSQESRAGALRAR 230 240 250 260 270 280 250 260 270 280 290 300 KIAA04 MAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIAR :.:::::::::::::::::::::::::::::::::::::::::: :::::::.::::::. gi|741 MTQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQRQVKKWPLHPVDRIAK 290 300 310 320 330 340 310 320 330 340 350 360 KIAA04 DLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAV ::::.:::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|741 DLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAV 350 360 370 380 390 400 370 380 390 400 410 420 KIAA04 FCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTN ::::::::::::::::::::::::::::::::::::::.::.: :::::::::. ::::: gi|741 FCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDIRTLLGAVTKLGFKIIYKDLTN 410 420 430 440 450 460 430 440 450 460 KIAA04 SHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR ::::::::.::::: ::::::::::.::::::::: gi|741 SHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKRR 470 480 490 500 >>gi|148684858|gb|EDL16805.1| RIKEN cDNA 1500003O22, iso (428 aa) initn: 1999 init1: 1999 opt: 2159 Z-score: 2149.2 bits: 406.9 E(): 5.2e-111 Smith-Waterman score: 2159; 77.882% identity (88.941% similar) in 425 aa overlap (42-464:5-428) 20 30 40 50 60 70 KIAA04 EPEWAEAAPVAAGLGPVISRPPPAASSQNKGSKRRQLLATLRALEAASLSQHPPSLCISD : :::.:::::::::::::::. ::: :: gi|148 MTLCGRKRRHLLATLRALEAASLSQQTPSLPGSD 10 20 30 80 90 100 110 120 KIAA04 SEEEEEE-RKKKCPKKASFASASAEVGKKGKKKCQKQGPPCSDSEEEVERKKKCHKQAL- :::::: :::. .. :.::.: ::::: : :::::.: :::: . : ..:::.:: gi|148 SEEEEEVGRKKRHLQRPSLASVSKEVGKKRKGKCQKQAPSISDSEGK-EIRRKCHRQAPP 40 50 60 70 80 90 130 140 150 160 170 180 KIAA04 VGSDSAEDEKRKRKCQKHAPINSAQHLDNVDQTGPKAWKGSTTNDPPKQSPGSTSPKPPH .:. :: .:: :::::... .. .: ::.:::: .. ...: :: : :: : ::. : gi|148 LGGVSAGEEKGKRKCQEYSSLHLTQPLDSVDQTVHNSRTSTATIDPSKPSPESMSPNSSH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA04 TLSRKQWRNRQKNKRRCKNKFQPPQVPDQAPAEAPTEKTEVSPVPRTDSHEARAGALRAR :::::::::::::::: ::::.: :.:.::: .: :.::: :::..::.:.:::::::: gi|148 TLSRKQWRNRQKNKRRHKNKFRPLQTPEQAPPKASIEETEVPPVPKSDSQESRAGALRAR 160 170 180 190 200 210 250 260 270 280 290 300 KIAA04 MAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIAR :.:::::::::::::::::::::::.:::::::::::::::::: :::::::.::::::. gi|148 MTQRLDGARFRYLNEQLYSGPSSAARRLFQEDPEAFLLYHRGFQRQVKKWPLHPVDRIAK 220 230 240 250 260 270 310 320 330 340 350 360 KIAA04 DLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAV ::::.:::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|148 DLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAV 280 290 300 310 320 330 370 380 390 400 410 420 KIAA04 FCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTN :::::::::::::::::::::: :::::::::::::::.:::: :::::::::. ::::: gi|148 FCLSLMGTNIRDFLEEANRVLKTGGLLKVAEVSSRFEDIRTFLGAVTKLGFKIIYKDLTN 340 350 360 370 380 390 430 440 450 460 KIAA04 SHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR ::::::::.::::: ::::::::::.::::::::: gi|148 SHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKRR 400 410 420 464 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 19:05:32 2009 done: Wed Mar 4 19:09:42 2009 Total Scan time: 1478.470 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]