# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh00236.fasta.nr -Q ../query/KIAA0416.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0416, 529 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7808670 sequences Expectation_n fit: rho(ln(x))= 4.7589+/-0.000183; mu= 13.2279+/- 0.010 mean_var=67.2160+/-13.013, 0's: 34 Z-trim: 151 B-trim: 178 in 1/66 Lambda= 0.156436 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|50400808|sp|O43300.3|LRRT2_HUMAN RecName: Full= ( 516) 3504 800.0 0 gi|158255564|dbj|BAF83753.1| unnamed protein produ ( 516) 3495 798.0 0 gi|148878145|gb|AAI46062.1| LRRTM2 protein [Bos ta ( 516) 3483 795.3 0 gi|73970928|ref|XP_538650.2| PREDICTED: similar to ( 516) 3482 795.1 0 gi|149726304|ref|XP_001504304.1| PREDICTED: simila ( 516) 3466 791.4 0 gi|68052344|sp|Q8BGA3.1|LRRT2_MOUSE RecName: Full= ( 515) 3443 786.2 0 gi|149017203|gb|EDL76254.1| rCG49309 [Rattus norve ( 515) 3439 785.3 0 gi|26338353|dbj|BAC32862.1| unnamed protein produc ( 515) 3437 784.9 0 gi|114602049|ref|XP_001172378.1| PREDICTED: leucin ( 485) 3292 752.1 7.7e-215 gi|73970930|ref|XP_863977.1| PREDICTED: similar to ( 485) 3270 747.2 2.4e-213 gi|221041746|dbj|BAH12550.1| unnamed protein produ ( 382) 2526 579.2 7.1e-163 gi|157676673|emb|CAP07971.1| unnamed protein produ ( 447) 1779 410.6 4.5e-112 gi|189528242|ref|XP_001920177.1| PREDICTED: sc:d03 ( 542) 1779 410.7 5.2e-112 gi|118090785|ref|XP_001233729.1| PREDICTED: simila ( 521) 1693 391.3 3.5e-106 gi|149622186|ref|XP_001514094.1| PREDICTED: hypoth ( 521) 1689 390.4 6.5e-106 gi|68052356|sp|Q8K377.1|LRRT1_MOUSE RecName: Full= ( 522) 1672 386.6 9.3e-105 gi|109103601|ref|XP_001113160.1| PREDICTED: simila ( 522) 1669 385.9 1.5e-104 gi|37181740|gb|AAQ88677.1| DFLL675 [Homo sapiens] ( 522) 1667 385.4 2e-104 gi|146330009|sp|Q86UE6.2|LRRT1_HUMAN RecName: Full ( 522) 1667 385.4 2e-104 gi|57098657|ref|XP_540204.1| PREDICTED: similar to ( 522) 1663 384.5 3.8e-104 gi|16552104|dbj|BAB71240.1| unnamed protein produc ( 522) 1661 384.1 5.2e-104 gi|68052305|sp|Q5R6B1.1|LRRT1_PONAB RecName: Full= ( 522) 1657 383.2 9.8e-104 gi|167008901|sp|A1A4H9.1|LRRT1_BOVIN RecName: Full ( 521) 1650 381.6 2.9e-103 gi|220672944|emb|CAX14819.1| leucine rich repeat t ( 524) 1650 381.6 2.9e-103 gi|126305357|ref|XP_001364560.1| PREDICTED: hypoth ( 525) 1648 381.1 4e-103 gi|149036453|gb|EDL91071.1| rCG56532, isoform CRA_ ( 523) 1647 380.9 4.7e-103 gi|56403707|emb|CAI29644.1| hypothetical protein [ ( 522) 1640 379.3 1.4e-102 gi|194220546|ref|XP_001916991.1| PREDICTED: simila ( 556) 1549 358.8 2.2e-96 gi|118092477|ref|XP_421532.2| PREDICTED: hypotheti ( 581) 1522 352.7 1.6e-94 gi|149689916|ref|XP_001503609.1| PREDICTED: leucin ( 581) 1513 350.7 6.4e-94 gi|73952720|ref|XP_859471.1| PREDICTED: similar to ( 513) 1512 350.4 6.8e-94 gi|73952722|ref|XP_546127.2| PREDICTED: similar to ( 581) 1511 350.3 8.8e-94 gi|29540625|gb|AAO67549.1| leucine-rich repeat tra ( 513) 1510 350.0 9.3e-94 gi|68052341|sp|Q86VH5.2|LRRT3_HUMAN RecName: Full= ( 581) 1509 349.8 1.2e-93 gi|148700097|gb|EDL32044.1| leucine rich repeat tr ( 586) 1508 349.6 1.4e-93 gi|34364623|emb|CAE45717.1| hypothetical protein [ ( 581) 1506 349.1 1.9e-93 gi|151553556|gb|AAI48966.1| LRRTM3 protein [Bos ta ( 536) 1505 348.9 2.1e-93 gi|149043897|gb|EDL97348.1| leucine rich repeat tr ( 582) 1503 348.5 3.1e-93 gi|26331336|dbj|BAC29398.1| unnamed protein produc ( 514) 1499 347.5 5.2e-93 gi|68052348|sp|Q8BZ81.2|LRRT3_MOUSE RecName: Full= ( 582) 1498 347.3 6.7e-93 gi|13874489|dbj|BAB46868.1| hypothetical protein [ ( 581) 1495 346.6 1.1e-92 gi|26331210|dbj|BAC29335.1| unnamed protein produc ( 582) 1492 346.0 1.7e-92 gi|47208588|emb|CAF93834.1| unnamed protein produc ( 497) 1482 343.7 7.3e-92 gi|66267230|gb|AAH94910.1| Lrrtm3 protein [Mus mus ( 514) 1481 343.4 8.7e-92 gi|194671486|ref|XP_876920.2| PREDICTED: similar t ( 518) 1478 342.8 1.4e-91 gi|73980428|ref|XP_540206.2| PREDICTED: similar to ( 518) 1478 342.8 1.4e-91 gi|126305460|ref|XP_001370698.1| PREDICTED: simila ( 718) 1474 342.0 3.4e-91 gi|29542433|gb|AAO67551.1| leucine-rich repeat tra ( 518) 1472 341.4 3.6e-91 gi|109103566|ref|XP_001112174.1| PREDICTED: leucin ( 518) 1472 341.4 3.6e-91 gi|34533657|dbj|BAC86764.1| unnamed protein produc ( 518) 1472 341.4 3.6e-91 >>gi|50400808|sp|O43300.3|LRRT2_HUMAN RecName: Full=Leuc (516 aa) initn: 3504 init1: 3504 opt: 3504 Z-score: 4271.5 bits: 800.0 E(): 0 Smith-Waterman score: 3504; 100.000% identity (100.000% similar) in 516 aa overlap (14-529:1-516) 10 20 30 40 50 60 KIAA04 QPRLNAASNVLRRMGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC ::::::::::::::::::::::::::::::::::::::::::::::: gi|504 MGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC 10 20 30 40 70 80 90 100 110 120 KIAA04 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL 410 420 430 440 450 460 490 500 510 520 KIAA04 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 470 480 490 500 510 >>gi|158255564|dbj|BAF83753.1| unnamed protein product [ (516 aa) initn: 3495 init1: 3495 opt: 3495 Z-score: 4260.6 bits: 798.0 E(): 0 Smith-Waterman score: 3495; 99.806% identity (99.806% similar) in 516 aa overlap (14-529:1-516) 10 20 30 40 50 60 KIAA04 QPRLNAASNVLRRMGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC ::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC 10 20 30 40 70 80 90 100 110 120 KIAA04 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQG :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|158 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWGHSILCHSPDHTQG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL 410 420 430 440 450 460 490 500 510 520 KIAA04 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 470 480 490 500 510 >>gi|148878145|gb|AAI46062.1| LRRTM2 protein [Bos taurus (516 aa) initn: 3483 init1: 3483 opt: 3483 Z-score: 4245.9 bits: 795.3 E(): 0 Smith-Waterman score: 3483; 99.031% identity (99.806% similar) in 516 aa overlap (14-529:1-516) 10 20 30 40 50 60 KIAA04 QPRLNAASNVLRRMGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC ::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC 10 20 30 40 70 80 90 100 110 120 KIAA04 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DSQGFHSVPNTTDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQG ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|148 KLNSLDSKILNSLRSLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHSPDHTQG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT :::::::::::::::::::::.:::::.:::::::::::::::::::::::::::::::: gi|148 EDILDAVHGFQLCWNLSTTVTAMATTYKDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|148 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQL 410 420 430 440 450 460 490 500 510 520 KIAA04 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 470 480 490 500 510 >>gi|73970928|ref|XP_538650.2| PREDICTED: similar to Leu (516 aa) initn: 3482 init1: 3482 opt: 3482 Z-score: 4244.7 bits: 795.1 E(): 0 Smith-Waterman score: 3482; 99.225% identity (99.806% similar) in 516 aa overlap (14-529:1-516) 10 20 30 40 50 60 KIAA04 QPRLNAASNVLRRMGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC ::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC 10 20 30 40 70 80 90 100 110 120 KIAA04 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DSQGFRSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQG ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|739 KLNSLDSKILNSLRSLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHSPDHTQG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|739 EDILDAVHGFQLCWNLSTTVTAMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|739 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQL 410 420 430 440 450 460 490 500 510 520 KIAA04 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 470 480 490 500 510 >>gi|149726304|ref|XP_001504304.1| PREDICTED: similar to (516 aa) initn: 3466 init1: 3466 opt: 3466 Z-score: 4225.2 bits: 791.4 E(): 0 Smith-Waterman score: 3466; 98.450% identity (99.806% similar) in 516 aa overlap (14-529:1-516) 10 20 30 40 50 60 KIAA04 QPRLNAASNVLRRMGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC ::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC 10 20 30 40 70 80 90 100 110 120 KIAA04 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG :::::::::::::.::::::::::.::::::::::::::::::::::::::::::::::: gi|149 DSQGFHSVPNATDQGSLGLSLRHNRITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQG ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|149 KLNSLDSKILNSLRSLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHSPDHTQG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT :::::::::::::::::::::.:.:::.:::::::::::::::::::::::::::.:::: gi|149 EDILDAVHGFQLCWNLSTTVTAMTTTYKDPTTEYTKRISSSSYHVGDKEIPTTAGMAVTT 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|149 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQL 410 420 430 440 450 460 490 500 510 520 KIAA04 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 470 480 490 500 510 >>gi|68052344|sp|Q8BGA3.1|LRRT2_MOUSE RecName: Full=Leuc (515 aa) initn: 2565 init1: 2565 opt: 3443 Z-score: 4197.2 bits: 786.2 E(): 0 Smith-Waterman score: 3443; 98.062% identity (99.419% similar) in 516 aa overlap (14-529:1-515) 10 20 30 40 50 60 KIAA04 QPRLNAASNVLRRMGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC :::::::::::::::::::::.::::::::::::::::::::::::: gi|680 MGLHFKWPLGAPMLAAIYAMSVVLKMLPALGMACPPKCRCEKLLFYC 10 20 30 40 70 80 90 100 110 120 KIAA04 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|680 DSQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN :::::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::: gi|680 LSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQG :::::::::::::.::::::::::::::: :.:::::::::::::::::::::::::::: gi|680 KLNSLDSKILNSLKSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHSILCHSPDHTQG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT :::::::::::::::::::::.:::::::::::::: ::::::::::::::::::::::: gi|680 EDILDAVHGFQLCWNLSTTVTAMATTYRDPTTEYTK-ISSSSYHVGDKEIPTTAGIAVTT 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|680 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQL 410 420 430 440 450 460 490 500 510 520 KIAA04 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV ::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 470 480 490 500 510 >>gi|149017203|gb|EDL76254.1| rCG49309 [Rattus norvegicu (515 aa) initn: 2567 init1: 2567 opt: 3439 Z-score: 4192.3 bits: 785.3 E(): 0 Smith-Waterman score: 3439; 98.062% identity (99.419% similar) in 516 aa overlap (14-529:1-515) 10 20 30 40 50 60 KIAA04 QPRLNAASNVLRRMGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC :::::::::::::::::::::.::::::::::::::::::::::::: gi|149 MGLHFKWPLGAPMLAAIYAMSVVLKMLPALGMACPPKCRCEKLLFYC 10 20 30 40 70 80 90 100 110 120 KIAA04 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|149 DSQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|149 LSSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQG ::::::::::.:::::::::::::::::: :.:::::::::::::::::::::::::::: gi|149 KLNSLDSKILSSLRSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHSILCHSPDHTQG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT :::::::::::::::::::::.:::::::::::::: ::::::::::::::::::::::: gi|149 EDILDAVHGFQLCWNLSTTVTAMATTYRDPTTEYTK-ISSSSYHVGDKEIPTTAGIAVTT 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|149 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQL 410 420 430 440 450 460 490 500 510 520 KIAA04 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV :::::::::::::::::.::::::::::::::::::::::::::::::: gi|149 RSQTRLHMSNMSDQGPYSEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 470 480 490 500 510 >>gi|26338353|dbj|BAC32862.1| unnamed protein product [M (515 aa) initn: 2565 init1: 2565 opt: 3437 Z-score: 4189.8 bits: 784.9 E(): 0 Smith-Waterman score: 3437; 97.868% identity (99.419% similar) in 516 aa overlap (14-529:1-515) 10 20 30 40 50 60 KIAA04 QPRLNAASNVLRRMGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYC :::::::::::::::::::::.::::::::::::::::::::::::: gi|263 MGLHFKWPLGAPMLAAIYAMSVVLKMLPALGMACPPKCRCEKLLFYC 10 20 30 40 70 80 90 100 110 120 KIAA04 DSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQG ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|263 DSQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 LSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN :::::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::: gi|263 LSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 KLNSLDSKILNSLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQG :::::::::::::.::::::::::::::: :.:::::::::::::::::::::::::::: gi|263 KLNSLDSKILNSLKSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHSILCHSPDHTQG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 EDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTT :::::::::::::::::::::.:::::::::::::: ::::::::::::::::::::::: gi|263 EDILDAVHGFQLCWNLSTTVTAMATTYRDPTTEYTK-ISSSSYHVGDKEIPTTAGIAVTT 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|263 EEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQL 410 420 430 440 450 460 490 500 510 520 KIAA04 RSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV .:::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QSQTRLHMSNMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 470 480 490 500 510 >>gi|114602049|ref|XP_001172378.1| PREDICTED: leucine ri (485 aa) initn: 3292 init1: 3292 opt: 3292 Z-score: 4013.3 bits: 752.1 E(): 7.7e-215 Smith-Waterman score: 3292; 100.000% identity (100.000% similar) in 485 aa overlap (45-529:1-485) 20 30 40 50 60 70 KIAA04 GLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNATDK :::::::::::::::::::::::::::::: gi|114 MACPPKCRCEKLLFYCDSQGFHSVPNATDK 10 20 30 80 90 100 110 120 130 KIAA04 GSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKI 40 50 60 70 80 90 140 150 160 170 180 190 KIAA04 FYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCR 100 110 120 130 140 150 200 210 220 230 240 250 KIAA04 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 160 170 180 190 200 210 260 270 280 290 300 310 KIAA04 SNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLR 220 230 240 250 260 270 320 330 340 350 360 370 KIAA04 SLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQGEDILDAVHGFQLCW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQGEDILDAVHGFQLCW 280 290 300 310 320 330 380 390 400 410 420 430 KIAA04 NLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTTEEHFPEPDNAIFTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTTEEHFPEPDNAIFTQ 340 350 360 370 380 390 440 450 460 470 480 490 KIAA04 RVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQLRSQTRLHMSNMSDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQLRSQTRLHMSNMSDQ 400 410 420 430 440 450 500 510 520 KIAA04 GPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV ::::::::::::::::::::::::::::::::::: gi|114 GPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 460 470 480 >>gi|73970930|ref|XP_863977.1| PREDICTED: similar to Leu (485 aa) initn: 3270 init1: 3270 opt: 3270 Z-score: 3986.5 bits: 747.2 E(): 2.4e-213 Smith-Waterman score: 3270; 99.175% identity (99.794% similar) in 485 aa overlap (45-529:1-485) 20 30 40 50 60 70 KIAA04 GLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNATDK :::::::::::::::::::::.:::::::: gi|739 MACPPKCRCEKLLFYCDSQGFRSVPNATDK 10 20 30 80 90 100 110 120 130 KIAA04 GSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKI 40 50 60 70 80 90 140 150 160 170 180 190 KIAA04 FYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCR 100 110 120 130 140 150 200 210 220 230 240 250 KIAA04 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 160 170 180 190 200 210 260 270 280 290 300 310 KIAA04 SNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLR 220 230 240 250 260 270 320 330 340 350 360 370 KIAA04 SLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQGEDILDAVHGFQLCW ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|739 SLTTVGLSGNLWECSPRICALASWLGSFQGRWEHSILCHSPDHTQGEDILDAVHGFQLCW 280 290 300 310 320 330 380 390 400 410 420 430 KIAA04 NLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTTEEHFPEPDNAIFTQ :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NLSTTVTAMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGIAVTTEEHFPEPDNAIFTQ 340 350 360 370 380 390 440 450 460 470 480 490 KIAA04 RVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQLRSQTRLHMSNMSDQ :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|739 RVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMSNMSDQ 400 410 420 430 440 450 500 510 520 KIAA04 GPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV ::::::::::::::::::::::::::::::::::: gi|739 GPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV 460 470 480 529 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 19:32:44 2009 done: Wed Mar 4 19:36:40 2009 Total Scan time: 1475.720 Total Display time: 0.220 Function used was FASTA [version 34.26.5 April 26, 2007]