hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02504939/chunk_1/iprscan-20080502-02504939.nocrc
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Query sequence: KIAA0432
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00717                                                 116.8    2.4e-30   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00717    1/2      32    81 ..     1    53 []    65.3  7.7e-15
SM00717    2/2      84   131 ..     1    53 []    51.5  1.1e-10

Alignments of top-scoring domains:
SM00717: domain 1 of 2, from 32 to 81: score 65.3, E = 7.7e-15
                   *->kkgeWteeEdelLleavkkyGkgtdndWakIakelpgRtpkqcrerw
                      k+g W   Ede+L++av kyGk   n+W++Ia+ l  +++kqc+ rw
    KIAA0432    32    KGGVWRNTEDEILKAAVMKYGK---NQWSRIASLLHRKSAKQCKARW 75   

                   rnllkp<-*
                   +++l+p   
    KIAA0432    76 YEWLDP    81   

SM00717: domain 2 of 2, from 84 to 131: score 51.5, E = 1.1e-10
                   *->kkgeWteeEdelLleavkkyGkgtdndWakIakelpgRtpkqcrerw
                      kk+eW+ eE+e+Ll++ k+++     +W+ Ia  ++ Rt+ qc e++
    KIAA0432    84    KKTEWSREEEEKLLHLAKLMP----TQWRTIAPIIG-RTAAQCLEHY 125  

                   rnllkp<-*
                     ll++   
    KIAA0432   126 EFLLDK    131  

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