hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03104087/chunk_1/iprscan-20080502-03104087.nocrc
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Query sequence: KIAA0444
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00490                                                 102.6    4.5e-26   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00490      1/1      78   162 ..     1    86 []   102.6  4.5e-26

Alignments of top-scoring domains:
SM00490: domain 1 of 1, from 78 to 162: score 102.6, E = 4.5e-26
                   *->delaelLkellkdpgikvarlHGglsqeeReeilekFrkgki...kv
                      d l+++L+ +    g+k+ r++Gg++   R+e++++F++   ++ ++
    KIAA0444    78    DLLEDFLEYE----GYKYERIDGGITGGLRQEAIDRFNAPGAqqfCF 120  

                   LvaTdvaerGlDipgvdlVInydlpwspasyiQRiGRaGRaG<-*
                   L++T+++++G+++  +d+VI+yd +w+p ++iQ+  Ra+R+G   
    KIAA0444   121 LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG    162  

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