hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03581019/chunk_1/iprscan-20080502-03581019.nocrc
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Query sequence: KIAA0470
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00498.16.fs FHA domain                                      44.8    1.2e-12   1
PF00498.16.ls FHA domain                                      46.5    8.1e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00498.16.fs   1/1      35   102 ..     1    94 []    44.8  1.2e-12
PF00498.16.ls   1/1      35   102 ..     1    94 []    46.5  8.1e-11

Alignments of top-scoring domains:
PF00498.16.fs: domain 1 of 1, from 35 to 102: score 44.8, E = 1.2e-12
                   *->vtiGRdsdsddilldddqdiqldgsiSrrHaeieykdggvglelafr
                      + +GR +d+   l  ++        + ++Ha+i y+  +++      
    KIAA0470    35    IFVGR-DDCELMLQSRS--------VDKQHAVINYDASTDEH----- 67   

                   paqvkefgvylrDlssknlnGatfvNgkrlgngepvrLksGdvirlG<-*
                            +++Dl+s+n  G tfvN++r++    + Lk  d +r+G   
    KIAA0470    68 ---------LVKDLGSLN--G-TFVNDVRIPEQTYITLKLEDKLRFG    102  

PF00498.16.ls: domain 1 of 1, from 35 to 102: score 46.5, E = 8.1e-11
                   *->vtiGRdsdsddilldddqdiqldgsiSrrHaeieykdggvglelafr
                      + +GR +d+   l  ++        + ++Ha+i y+  +++      
    KIAA0470    35    IFVGR-DDCELMLQSRS--------VDKQHAVINYDASTDEH----- 67   

                   paqvkefgvylrDlssknlnGatfvNgkrlgngepvrLksGdvirlG<-*
                            +++Dl+s+n  G tfvN++r++    + Lk  d +r+G   
    KIAA0470    68 ---------LVKDLGSLN--G-TFVNDVRIPEQTYITLKLEDKLRFG    102  

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