hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-04324552/chunk_1/iprscan-20080502-04324552.nocrc
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Query sequence: KIAA0491
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03114.8.ls BAR domain                                     328.4    1.1e-95   1
PF03114.8.fs BAR domain                                     326.5    4.4e-95   1
PF00018.18.fs SH3 domain                                      44.0      3e-11   1
PF00018.18.ls SH3 domain                                      45.9    1.3e-10   1
PF07653.7.fs Variant SH3 domain                              37.0    5.2e-10   1
PF07653.7.ls Variant SH3 domain                              38.8    1.8e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03114.8.fs   1/1      37   280 ..     1   264 []   326.5  4.4e-95
PF03114.8.ls   1/1      37   280 ..     1   264 []   328.4  1.1e-95
PF00018.18.fs   1/1     334   390 ..     1    59 []    44.0    3e-11
PF00018.18.ls   1/1     334   390 ..     1    59 []    45.9  1.3e-10
PF07653.7.fs   1/1     335   390 ..     1    69 []    37.0  5.2e-10
PF07653.7.ls   1/1     335   390 ..     1    69 []    38.8  1.8e-08

Alignments of top-scoring domains:
PF03114.8.fs: domain 1 of 1, from 37 to 280: score 326.5, E = 4.4e-95
                   *->lkKqAGgffnRasqllkeKvGkaekTkvLDedFeelerrfdtteklv
                      l+ +AG+f++Ra q+++eK+G aekT+ LD ++e+l  ++++t+ ++
    KIAA0491    37    LAADAGTFLSRAVQFTEEKLGQAEKTE-LDAHLENLLSKAECTKIWT 82   

                   kklvketklYlqpnpaarakqkvleklskrrgqvkrkgypqPetlLaetm
                   +k++k+t+  lqpnp ar +++v+ekl+  r++++r+++p+   lL+++m
    KIAA0491    83 EKIMKQTEVLLQPNPNARIEEFVYEKLD--RKAPSRINNPE---LLGQYM 127  

                   qeigeelgddsedPfGkaLekygeamkqlaqlleqldervkqnfldPltn
                   +++g+e+g+++   +G+aL+k+ge++k+++ + ++l+++ + nfl+Pl+n
    KIAA0491   128 IDAGTEFGPGTA--YGNALIKCGETQKRIGTADRELIQTSALNFLTPLRN 175  

                   llekefkeiqkhikKlerKrLDyDakrtrlkkaktkkskkakDekklakA
                   ++e+++k+i k++k l++KrLD+Da++trlkkak+ ++++++        
    KIAA0491   176 FIEGDYKTIAKERKLLQNKRLDLDAAKTRLKKAKAAETRNSS-------- 217  

                   dqleeElrqAqqkfEelneeLkeeLpnlleleveflvnqlqafveaqldf
                      e+Elr  q +f++++e+++ +L++++++++++l ++l +fveaq+++
    KIAA0491   218 ---EQELRITQSEFDRQAEITRLLLEGISSTHAHHL-RCLNDFVEAQMTY 263  

                   hrqsaqlleqlqqqLdk<-*
                   ++q++q++ +lq qL++   
    KIAA0491   264 YAQCYQYMLDLQKQLGS    280  

PF03114.8.ls: domain 1 of 1, from 37 to 280: score 328.4, E = 1.1e-95
                   *->lkKqAGgffnRasqllkeKvGkaekTkvLDedFeelerrfdtteklv
                      l+ +AG+f++Ra q+++eK+G aekT+ LD ++e+l  ++++t+ ++
    KIAA0491    37    LAADAGTFLSRAVQFTEEKLGQAEKTE-LDAHLENLLSKAECTKIWT 82   

                   kklvketklYlqpnpaarakqkvleklskrrgqvkrkgypqPetlLaetm
                   +k++k+t+  lqpnp ar +++v+ekl+  r++++r+++p+   lL+++m
    KIAA0491    83 EKIMKQTEVLLQPNPNARIEEFVYEKLD--RKAPSRINNPE---LLGQYM 127  

                   qeigeelgddsedPfGkaLekygeamkqlaqlleqldervkqnfldPltn
                   +++g+e+g+++   +G+aL+k+ge++k+++ + ++l+++ + nfl+Pl+n
    KIAA0491   128 IDAGTEFGPGTA--YGNALIKCGETQKRIGTADRELIQTSALNFLTPLRN 175  

                   llekefkeiqkhikKlerKrLDyDakrtrlkkaktkkskkakDekklakA
                   ++e+++k+i k++k l++KrLD+Da++trlkkak+ ++++++        
    KIAA0491   176 FIEGDYKTIAKERKLLQNKRLDLDAAKTRLKKAKAAETRNSS-------- 217  

                   dqleeElrqAqqkfEelneeLkeeLpnlleleveflvnqlqafveaqldf
                      e+Elr  q +f++++e+++ +L++++++++++l ++l +fveaq+++
    KIAA0491   218 ---EQELRITQSEFDRQAEITRLLLEGISSTHAHHL-RCLNDFVEAQMTY 263  

                   hrqsaqlleqlqqqLdk<-*
                   ++q++q++ +lq qL++   
    KIAA0491   264 YAQCYQYMLDLQKQLGS    280  

PF00018.18.fs: domain 1 of 1, from 334 to 390: score 44.0, E = 3e-11
                   *->kkvvALYDYearesdELsFkkGDvitvleksdd.pgWWkgrlkgtgG
                      +k+++LYDY+a +s ELs+   +vitv + +  +++W+ g++    +
    KIAA0491   334    RKARVLYDYDAANSTELSLLADEVITVFSVVGMdSDWLMGERG---N 377  

                   keGliPsNYVepv<-*
                   ++G +P +Y+e+    
    KIAA0491   378 QKGKVPITYLELL    390  

PF00018.18.ls: domain 1 of 1, from 334 to 390: score 45.9, E = 1.3e-10
                   *->kkvvALYDYearesdELsFkkGDvitvleksdd.pgWWkgrlkgtgG
                      +k+++LYDY+a +s ELs+   +vitv + +  +++W+ g++    +
    KIAA0491   334    RKARVLYDYDAANSTELSLLADEVITVFSVVGMdSDWLMGERG---N 377  

                   keGliPsNYVepv<-*
                   ++G +P +Y+e+    
    KIAA0491   378 QKGKVPITYLELL    390  

PF07653.7.fs: domain 1 of 1, from 335 to 390: score 37.0, E = 5.2e-10
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidv..ggskdddgw
                      ++r++ dy+a ++ +e      Lsl +++v+ V+    g   +d +w
    KIAA0491   335    KARVLYDYDA-ANSTE------LSLLADEVITVF-SvvG---MDSDW 370  

                   wegeslggGrrrRGlvPssaveel<-*
                     ge+  g+++  G vP +++e l   
    KIAA0491   371 LMGER--GNQK--GKVPITYLELL    390  

PF07653.7.ls: domain 1 of 1, from 335 to 390: score 38.8, E = 1.8e-08
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidv..ggskdddgw
                      ++r++ dy+a ++ +e      Lsl +++v+ V+    g   +d +w
    KIAA0491   335    KARVLYDYDA-ANSTE------LSLLADEVITVF-SvvG---MDSDW 370  

                   wegeslggGrrrRGlvPssaveel<-*
                     ge+  g+++  G vP +++e l   
    KIAA0491   371 LMGER--GNQK--GKVPITYLELL    390  

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