hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05071492/chunk_1/iprscan-20080502-05071492.nocrc
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Query sequence: KIAA0512
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04826.4.ls Protein of unknown function (DUF634)           662.0   4.3e-196   1
PF04826.4.fs Protein of unknown function (DUF634)           660.0   1.7e-195   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04826.4.fs   1/1     443   704 ..     1   264 []   660.0 1.7e-195
PF04826.4.ls   1/1     443   704 ..     1   264 []   662.0 4.3e-196

Alignments of top-scoring domains:
PF04826.4.fs: domain 1 of 1, from 443 to 704: score 660.0, E = 1.7e-195
                   *->rrpsrikkfafPykiDdiLsaeeLqKvLnLLesTeDPfIqevALitL
                      rrp++++k++fPy+iD+iL++++L+KvL+LL++++DPfIq+vAL+tL
    KIAA0512   443    RRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTL 489  

                   GNNAaysfNQeiIReLGGvPIianlintrdPiikEKAliaLNNLSvNvEN
                   +NNA+ys+NQe+IR+LGG+PIian+in++dP+ikEKAl+a+NNLS+N+EN
    KIAA0512   490 SNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYEN 539  

                   QrKIkvYvnqVCdDtmssrLNSAVQlaGLrLLTNMTvTNdYQHlLanSis
                   Q++++vY+n+V+dD+m+s+LNSAVQ++GL++LTNMT+TNdYQHlL+nSi+
    KIAA0512   540 QGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIA 589  

                   dlFrLLslGNgkTKvqVLKLLlNlsENPaMtreLlsaqVpSsLlSLFNkk
                   ++FrLLs+G+gk+Kv++LK+L+N++ENP+M+++Lls+qVp+s++SL+N++
    KIAA0512   590 NFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSY 639  

                   vakEiLlnaLtLFeNIndnlkaEgnlanqkeFskGSLFfLlkesgvCakK
                   v++EiL+naLtLFe+I dnl+aE  ++n++eF+kGSLF+L+++sgvC+kK
    KIAA0512   640 VESEILINALTLFEIIYDNLRAE--VFNYREFNKGSLFYLCTTSGVCVKK 687  

                   irALasHHDleVKvKVi<-*
                   irALa+HHDl+VKvKVi   
    KIAA0512   688 IRALANHHDLLVKVKVI    704  

PF04826.4.ls: domain 1 of 1, from 443 to 704: score 662.0, E = 4.3e-196
                   *->rrpsrikkfafPykiDdiLsaeeLqKvLnLLesTeDPfIqevALitL
                      rrp++++k++fPy+iD+iL++++L+KvL+LL++++DPfIq+vAL+tL
    KIAA0512   443    RRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTL 489  

                   GNNAaysfNQeiIReLGGvPIianlintrdPiikEKAliaLNNLSvNvEN
                   +NNA+ys+NQe+IR+LGG+PIian+in++dP+ikEKAl+a+NNLS+N+EN
    KIAA0512   490 SNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYEN 539  

                   QrKIkvYvnqVCdDtmssrLNSAVQlaGLrLLTNMTvTNdYQHlLanSis
                   Q++++vY+n+V+dD+m+s+LNSAVQ++GL++LTNMT+TNdYQHlL+nSi+
    KIAA0512   540 QGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIA 589  

                   dlFrLLslGNgkTKvqVLKLLlNlsENPaMtreLlsaqVpSsLlSLFNkk
                   ++FrLLs+G+gk+Kv++LK+L+N++ENP+M+++Lls+qVp+s++SL+N++
    KIAA0512   590 NFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSY 639  

                   vakEiLlnaLtLFeNIndnlkaEgnlanqkeFskGSLFfLlkesgvCakK
                   v++EiL+naLtLFe+I dnl+aE  ++n++eF+kGSLF+L+++sgvC+kK
    KIAA0512   640 VESEILINALTLFEIIYDNLRAE--VFNYREFNKGSLFYLCTTSGVCVKK 687  

                   irALasHHDleVKvKVi<-*
                   irALa+HHDl+VKvKVi   
    KIAA0512   688 IRALANHHDLLVKVKVI    704  

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