hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-05285637/chunk_1/iprscan-20080502-05285637.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0525 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF01433.10.fs Peptidase family M1 564.6 2e-198 1 PF01433.10.ls Peptidase family M1 566.5 2.5e-167 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF01433.10.fs 1/1 57 444 .. 1 438 [] 564.6 2e-198 PF01433.10.ls 1/1 57 444 .. 1 438 [] 566.5 2.5e-167 Alignments of top-scoring domains: PF01433.10.fs: domain 1 of 1, from 57 to 444: score 564.6, E = 2e-198 *->LPttvkPlhYdLtlkpkFgnlpekpntdgnftFsGsvtItltlqatk LP+ v P+hYdL +++ nl++ tF G+ ++++ +a+ KIAA0525 57 LPEYVIPVHYDLLIHA---NLTTL-------TFWGTTKVEI--TAS- 90 aatdeIvLhakdltissevrvalvlvngdqklpesvefdlqsetdlavdd ++t++I+Lh+++l+is ++l+ g++ +e+ + +++++ KIAA0525 91 QPTSTIILHSHHLQISR---ATLRKGAGERLSEEPLQVLEHPPQ------ 131 nkekltinlpealsagqgpytLkIeyegklndismlGfYrseYtdgkdge e++ + +pe+l g pyt+ I y g+l+ + GfY+s+Y+++ ge KIAA0525 132 --EQIALLAPEPLLVGL-PYTVVIHYAGNLSE-TFHGFYKSTYRTK-EGE 176 kkymatTQfeeptdARraFPCfDEPafKATFtitiihpekgttalSNmpv + +a+TQfe pt+AR aFPCfDEPafKA F+i+i+++ + + a+SNmp KIAA0525 177 LRILASTQFE-PTAARMAFPCFDEPAFKASFSIKIRRE-PRHLAISNMPL 224 isttkdddgptrvittFetTpkMStYLlAfvVGeleyietetkdgydarl ++++ +g + +++F T+kMStYL+Af+++++e+++ tk+g KIAA0525 225 VKSVTVAEG--LIEDHFDVTVKMSTYLVAFIISDFESVSKITKSG----- 267 vpvrvyarpgainagqgqyalevgqklleffedyfgipYplpanlklDqv v v+vya p++in q++yal+ ++ llef+edyf ipYplp k+D++ KIAA0525 268 VKVSVYAVPDKIN--QADYALDAAVTLLEFYEDYFSIPYPLP---KQDLA 312 AvPdFsaGAMENWGLiTyrepaLLydprsssnsdkqrVaeViAHELAHQW A+PdF+ GAMENWGL Tyre aLL+d + ss s+k ++ ++AHELAHQW KIAA0525 313 AIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITVTVAHELAHQW 362 FGNLVTmkWWddLWLNEGFAtymEylgtdelggepewnieaqfvlrddvv FGNLVTm+WW+dLWLNEGFA +mE++++ + +pe ++ ++f+ + KIAA0525 363 FGNLVTMEWWNDLWLNEGFAKFMEFVSVSVT--HPELKVGDYFFGK---C 407 qlalasDslgsshPitnklvevntpaeiseiFdsaisYeKG<-* a++ D+l+sshP++ v++pa+i e+Fd ++sY+KG KIAA0525 408 FDAMEVDALNSSHPVS---TPVENPAQIREMFD-DVSYDKG 444 PF01433.10.ls: domain 1 of 1, from 57 to 444: score 566.5, E = 2.5e-167 *->LPttvkPlhYdLtlkpkFgnlpekpntdgnftFsGsvtItltlqatk LP+ v P+hYdL +++ nl++ tF G+ ++++ +a+ KIAA0525 57 LPEYVIPVHYDLLIHA---NLTTL-------TFWGTTKVEI--TAS- 90 aatdeIvLhakdltissevrvalvlvngdqklpesvefdlqsetdlavdd ++t++I+Lh+++l+is ++l+ g++ +e+ + +++++ KIAA0525 91 QPTSTIILHSHHLQISR---ATLRKGAGERLSEEPLQVLEHPPQ------ 131 nkekltinlpealsagqgpytLkIeyegklndismlGfYrseYtdgkdge e++ + +pe+l g pyt+ I y g+l+ + GfY+s+Y+++ ge KIAA0525 132 --EQIALLAPEPLLVGL-PYTVVIHYAGNLSE-TFHGFYKSTYRTK-EGE 176 kkymatTQfeeptdARraFPCfDEPafKATFtitiihpekgttalSNmpv + +a+TQfe pt+AR aFPCfDEPafKA F+i+i+++ + + a+SNmp KIAA0525 177 LRILASTQFE-PTAARMAFPCFDEPAFKASFSIKIRRE-PRHLAISNMPL 224 isttkdddgptrvittFetTpkMStYLlAfvVGeleyietetkdgydarl ++++ +g + +++F T+kMStYL+Af+++++e+++ tk+g KIAA0525 225 VKSVTVAEG--LIEDHFDVTVKMSTYLVAFIISDFESVSKITKSG----- 267 vpvrvyarpgainagqgqyalevgqklleffedyfgipYplpanlklDqv v v+vya p++in q++yal+ ++ llef+edyf ipYplp k+D++ KIAA0525 268 VKVSVYAVPDKIN--QADYALDAAVTLLEFYEDYFSIPYPLP---KQDLA 312 AvPdFsaGAMENWGLiTyrepaLLydprsssnsdkqrVaeViAHELAHQW A+PdF+ GAMENWGL Tyre aLL+d + ss s+k ++ ++AHELAHQW KIAA0525 313 AIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITVTVAHELAHQW 362 FGNLVTmkWWddLWLNEGFAtymEylgtdelggepewnieaqfvlrddvv FGNLVTm+WW+dLWLNEGFA +mE++++ + +pe ++ ++f+ + KIAA0525 363 FGNLVTMEWWNDLWLNEGFAKFMEFVSVSVT--HPELKVGDYFFGK---C 407 qlalasDslgsshPitnklvevntpaeiseiFdsaisYeKG<-* a++ D+l+sshP++ v++pa+i e+Fd ++sY+KG KIAA0525 408 FDAMEVDALNSSHPVS---TPVENPAQIREMFD-DVSYDKG 444 //