hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06431055/chunk_1/iprscan-20080502-06431055.nocrc
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Query sequence: KIAA0568
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00250                                                  60.5    2.1e-13   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00250    1/2    1321  1355 ..     1    39 []    34.3  1.7e-05
SM00250    2/2    1370  1405 ..     1    39 []    26.3   0.0043

Alignments of top-scoring domains:
SM00250: domain 1 of 2, from 1321 to 1355: score 34.3, E = 1.7e-05
                   *->qrlleaqaqatgGiiDPetgeklSveeAirrGlidpetg<-*
                        +l+ ++    ++i+P tg++lS+eeA r+Glid++++   
    KIAA0568  1321    ENHLRRSI----VVIHPDTGRELSPEEAHRAGLIDWNMF    1355 

SM00250: domain 2 of 2, from 1370 to 1405: score 26.3, E = 0.0043
                   *->qrlleaqaqatgGiiDPetgeklSveeAirrGlidpetg<-*
                       + + +++    +i+D+++g+k S+eeA++ G + p ++   
    KIAA0568  1370    VKGPNGES---SVIHDRKSGKKFSIEEALQSGRLTPAQY    1405 

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