hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06505935/chunk_1/iprscan-20080502-06505935.nocrc
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Query sequence: KIAA0571
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00169.19.fs PH domain                                       77.0    5.7e-23   1
PF00169.19.ls PH domain                                       78.0    2.7e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00169.19.ls   1/1      20   124 ..     1    92 []    78.0  2.7e-20
PF00169.19.fs   1/1      32   124 ..    14    92 .]    77.0  5.7e-23

Alignments of top-scoring domains:
PF00169.19.ls: domain 1 of 1, from 20 to 124: score 78.0, E = 2.7e-20
                   *->vikeGwLlkkggkkswkkRyfvLfd.......dvLlyykdkk.kkpk
                       ++e  L+  +  k wkkR+f+L++++ ++++dvL+yyk++++kkp 
    KIAA0571    20    QVRELDLWYHH-EKAWKKRWFILRSgrmsgdpDVLEYYKNDHsKKPL 65   

                   gsipLsgi.qvtkvpdn.....krkncFeirt.dretlllqaeseeerke
                   ++i+L+ ++qv+     ++++  + ++F i+t++r t++l ae+ee++++
    KIAA0571    66 RIINLNFCeQVDAGLTFnkkelQDSFVFDIKTsER-TFYLVAETEEDMNK 114  

                   Wvkaiqsair<-*
                   Wv++i++ +    
    KIAA0571   115 WVQSICQICG    124  

PF00169.19.fs: domain 1 of 1, from 32 to 124: score 77.0, E = 5.7e-23
                   *->kswkkRyfvLfd.......dvLlyykdkk.kkpkgsipLsgi.qvtk
                      k wkkR+f+L++++ ++++dvL+yyk++++kkp ++i+L+ ++qv+ 
    KIAA0571    32    KAWKKRWFILRSgrmsgdpDVLEYYKNDHsKKPLRIINLNFCeQVDA 78   

                   vpdn.....krkncFeirt.dretlllqaeseeerkeWvkaiqsair<-*
                       ++++  + ++F i+t++r t++l ae+ee++++Wv++i++ +    
    KIAA0571    79 GLTFnkkelQDSFVFDIKTsER-TFYLVAETEEDMNKWVQSICQICG    124  

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