hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06590283/chunk_1/iprscan-20080502-06590283.nocrc
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Query sequence: KIAA0576
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 166.6    2.4e-45  12

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/12    183   209 ..     1    23 []    10.8       19
SM00355      2/12    226   246 ..     1    23 []     4.0  1.1e+02
SM00355      3/12    267   291 ..     1    23 []    14.1      8.1
SM00355      4/12    329   351 ..     1    23 []    16.4      4.1
SM00355      5/12    376   400 ..     1    23 []     9.3       28
SM00355      6/12    512   535 ..     1    23 []    23.7    0.025
SM00355      7/12    545   568 ..     1    23 []     7.2       49
SM00355      8/12    620   645 ..     1    23 []    13.1       11
SM00355      9/12    650   673 ..     1    23 []    14.6      7.1
SM00355     10/12    681   703 ..     1    23 []    17.9      1.5
SM00355     11/12    767   790 ..     1    23 []    21.1     0.15
SM00355     12/12    803   826 ..     1    23 []    14.4      7.6

Alignments of top-scoring domains:
SM00355: domain 1 of 12, from 183 to 209: score 10.8, E = 19
                   *->ykCpi.gCgksfssk.aLkrHmr..vH<-*
                        Cpi  C+k f + + L  H+++  H   
    KIAA0576   183    ILCPImHCNKEFDNGhLLLGHLKrfDH    209  

SM00355: domain 2 of 12, from 226 to 246: score 4.0, E = 1.1e+02
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C + C k+f ++++++ H+      
    KIAA0576   226    FACVV-CYKKFVTQqQYRDHLF--    246  

SM00355: domain 3 of 12, from 267 to 291: score 14.1, E = 8.1
                   *->ykCpigCgksfssk.aLkrHmr..vH<-*
                      + Cp  C   fs+k++  +Hm ++ H   
    KIAA0576   267    FACPN-CFLLFSRKeECSKHMSgkNH    291  

SM00355: domain 4 of 12, from 329 to 351: score 16.4, E = 4.1
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       kC   C+k+ +s+ +L+ H rvH   
    KIAA0576   329    VKCVA-CHKTLRSHmELTAHFRVH    351  

SM00355: domain 5 of 12, from 376 to 400: score 9.3, E = 28
                   *->ykCpigCgksfssk.aLkrHmr..vH<-*
                        Cp  C+++f ++++ ++H +++ H   
    KIAA0576   376    GYCPD-CNQVFVDEtSTQNHKQnsGH    400  

SM00355: domain 6 of 12, from 512 to 535: score 23.7, E = 0.025
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ykC + Cgk++ + +  + Hm ++H   
    KIAA0576   512    YKCVV-CGKVCDDSgVIRLHMSrIH    535  

SM00355: domain 7 of 12, from 545 to 568: score 7.2, E = 49
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      + C   C+k  ++k+    H+ + H   
    KIAA0576   545    FWCRT-CKKELTRKdTIMAHVTeFH    568  

SM00355: domain 8 of 12, from 620 to 645: score 13.1, E = 11
                   *->ykCpigCgksfssk.aLkrHmr...vH<-*
                      ++C i C   f s++  k+H ++  +H   
    KIAA0576   620    WQCRI-CEDMFDSQeYVKQHCMslaSH    645  

SM00355: domain 9 of 12, from 650 to 673: score 14.6, E = 7.1
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y C + C k f+  + L rH ++ H   
    KIAA0576   650    YSCAH-CRKPFHKIeTLYRHCQdEH    673  

SM00355: domain 10 of 12, from 681 to 703: score 17.9, E = 1.5
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C + C+  f+ ++a+  H+  H   
    KIAA0576   681    YFCGL-CDLIFNVEeAFLSHYEEH    703  

SM00355: domain 11 of 12, from 767 to 790: score 21.1, E = 0.15
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ++C++ C+ +  + ++++ H+ +vH   
    KIAA0576   767    FRCSL-CSATAQNLtDMNTHIHqVH    790  

SM00355: domain 12 of 12, from 803 to 826: score 14.4, E = 7.6
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                       kC   C k f+++++ ++H  ++H   
    KIAA0576   803    IKCGT-CTKAFHDPeSAQQHFHrKH    826  

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