hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07391678/chunk_1/iprscan-20080502-07391678.nocrc
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Query sequence: KIAA0598
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF00685.17.fs   Sulfotransferase domain                  27.8      2e-07   2
PF00685.17.ls   Sulfotransferase domain                 -19.0    2.6e-06   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF00685.17.ls     1/1     306   608 ..     1   342 []   -19.0  2.6e-06
PF00685.17.fs     2/2     434   559 ..   138   258 ..    25.9  6.7e-07

Alignments of top-scoring domains:
PF00685.17.ls: domain 1 of 1, from 306 to 608: score -19.0, E = 2.6e-06
                   *->pdDvlivtyPKSGTTWlqeilslqdiFYlFePLwhvEipnrgdfssp
                      ++++ i++ PK+GTT l+  l+l              +p + +f   
    KIAA0598   306    LPHFYIIGQPKCGTTDLYDRLRL--------------HPEV-KF--- 334  

                   ekceepplfnnphnrvPfLEwymlffPetlesvppe..............
                   ++++ep+     + r +f              + +  +++ + ++  +  
    KIAA0598   335 SAIKEPHW----WTRKRFGIV----------RLRDGlrdrypvedyldlf 370  

                   .............................sdrlrecgllnltlaleklas
                   +   ++ +++ + ++ +++++ ++   ++     ++ +   t+  + +  
    KIAA0598   371 dlaahqihqglqassakeqskmntiiigeASASTMWDNNAWTFFYDNSTD 420  

                   yfhveegverlkalpsPRlikTHLPlhlLPkslwdskcKiIYvvRNPKDv
                     ++  + + ++a                      ++++ I ++R+P  +
    KIAA0598   421 GEPPFLTQDFIHAF--------------------QPNARLIVMLRDPVER 450  

                   aVSyYhfsrmakewmkwlervilpapgtpsfevlanal.effelFla...
                   ++S+Y ++ +++           + +++ + e      +e ++lF +   
    KIAA0598   451 LYSDYLYFASSN-----------KSADD-FHE----KVtEALQLFENcml 484  

                   ..................GkvvyGsyfdHvkgWweaSlrkpenvLflsYE
                   + + +    +++ ++  + +++ G y+ +++ W++   ++++++L+l+ E
    KIAA0598   485 dyslracvynntlnnampVRLQVGLYAVYLLDWLS--VFDKQQFLILRLE 532  

                   dlkkDPrgeikkiaeFLGkp.lseEeEeGrldkivkhlsFenmKgnpcvn
                   d + + + ++ k+ +FL + +lse++                m + p++n
    KIAA0598   533 DHASNVKYTMHKVFQFLNLGpLSEKQ----EAL---------MTKSPASN 569  

                   yselpkeimdhensiEnspffRKGivgdWGRqknhftveqaekfdeiye.
                                    ++   + ++  W      +t    + ++++y++
    KIAA0598   570 A----------------RRPEDRNLGPMW-----PITQ---KILRDFYRp 595  

                   hN.klsekmkgtg<-*
                   +N  l + +++     
    KIAA0598   596 FNaRLAQVLADEA    608  

PF00685.17.fs: domain 2 of 2, from 434 to 559: score 25.9, E = 6.7e-07
                   *->wdskcKiIYvvRNPKDvaVSyYhfsrmakewmkwlervilpapgtps
                      + ++++ I ++R+P  +++S+Y ++ +++           + +++ +
    KIAA0598   434    FQPNARLIVMLRDPVERLYSDYLYFASSN-----------KSADD-F 468  

                   fevlanal.effelFla.....................GkvvyGsyfdHv
                    e      +e ++lF +   + + +    +++ ++  + +++ G y+ ++
    KIAA0598   469 HE----KVtEALQLFENcmldyslracvynntlnnampVRLQVGLYAVYL 514  

                   kgWweaSlrkpenvLflsYEdlkkDPrgeikkiaeFLGkp.lseEeE<-*
                   + W++   ++++++L+l+ Ed + + + ++ k+ +FL + +lse++E   
    KIAA0598   515 LDWLS--VFDKQQFLILRLEDHASNVKYTMHKVFQFLNLGpLSEKQE    559  

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