hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-08150962/chunk_1/iprscan-20080502-08150962.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0619 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 245.1 1.4e-70 1 PF00069.15.fs Protein kinase domain 243.2 5.2e-70 1 PF08912.1.ls Rho Binding 148.8 1.4e-41 1 PF08912.1.fs Rho Binding 146.8 5.4e-41 1 PF02185.6.fs Hr1 repeat 50.6 3e-13 1 PF02185.6.ls Hr1 repeat 52.6 1.3e-12 1 PF00433.14.fs Protein kinase C terminal domain 39.4 4e-11 1 PF07714.7.fs Protein tyrosine kinase 34.8 5.2e-10 2 PF00433.14.ls Protein kinase C terminal domain 41.4 2.9e-09 1 PF00169.19.fs PH domain 31.0 5.7e-09 2 PF00130.12.fs Phorbol esters/diacylglycerol binding dom 23.7 7.9e-06 1 PF02370.7.ls M protein repeat 29.1 1.4e-05 8 PF00169.19.ls PH domain 26.8 6.9e-05 1 PF00130.12.ls Phorbol esters/diacylglycerol binding dom 20.7 9e-05 1 PF02370.7.fs M protein repeat 19.0 0.00067 6 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 132 394 .. 1 287 [] 243.2 5.2e-70 PF00069.15.ls 1/1 132 394 .. 1 287 [] 245.1 1.4e-70 PF07714.7.fs 2/2 192 335 .. 67 219 .. 27.8 5.7e-08 PF00433.14.ls 1/1 414 459 .. 1 47 [] 41.4 2.9e-09 PF00433.14.fs 1/1 414 459 .. 1 47 [] 39.4 4e-11 PF02185.6.fs 1/1 515 599 .. 1 82 [] 50.6 3e-13 PF02185.6.ls 1/1 515 599 .. 1 82 [] 52.6 1.3e-12 PF08912.1.fs 1/1 1018 1086 .. 1 69 [] 146.8 5.4e-41 PF08912.1.ls 1/1 1018 1086 .. 1 69 [] 148.8 1.4e-41 PF00169.19.ls 1/1 1191 1298 .. 1 92 [] 26.8 6.9e-05 PF00169.19.fs 1/2 1191 1275 .. 1 67 [. 28.9 2.5e-08 PF00130.12.fs 1/1 1301 1343 .. 1 43 [. 23.7 7.9e-06 PF00130.12.ls 1/1 1301 1353 .. 1 55 [] 20.7 9e-05 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 132 to 394: score 243.2, E = 5.2e-70 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y +++++G+G+fG+V + +hk ++k++A+K ++k + + d + ++ KIAA0619 132 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFW 178 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E i++ ++p +v+l+++f+d+++ly+V+Ey++gG dL ++s KIAA0619 179 E-ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG----DLVNLMS- 222 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv + + +e+ ak++ +++ +l+ +Hs+g iHRD+KP+N Lld++g+ KIAA0619 223 ---NYDV--PEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGH 267 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvll...ggngygt + K+aDFG + k++++ ++++t vGTp+Y++PEvl++++g+ yg+ KIAA0619 268 L----KLADFGTCMKMDEtGMVhCDTAVGTPDYISPEVLKsqgGDGFYGR 313 kvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspew ++D+WS+Gv lye+l G +PF+ + + + ki+ +++ +pe+ KIAA0619 314 ECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMDHKNSLCFPED 358 dsisrsefrrlpnlseeakdLikkcLnkDPskRlt...aeeilqHPwf<- +is + ak Li+ L+ D + Rl++++ eei qHP+f KIAA0619 359 AEIS-----------KHAKNLICAFLT-DREVRLGrngVEEIRQHPFF 394 * KIAA0619 - - PF00069.15.ls: domain 1 of 1, from 132 to 394: score 245.1, E = 1.4e-70 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y +++++G+G+fG+V + +hk ++k++A+K ++k + + d + ++ KIAA0619 132 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFW 178 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E i++ ++p +v+l+++f+d+++ly+V+Ey++gG dL ++s KIAA0619 179 E-ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG----DLVNLMS- 222 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv + + +e+ ak++ +++ +l+ +Hs+g iHRD+KP+N Lld++g+ KIAA0619 223 ---NYDV--PEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGH 267 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvll...ggngygt + K+aDFG + k++++ ++++t vGTp+Y++PEvl++++g+ yg+ KIAA0619 268 L----KLADFGTCMKMDEtGMVhCDTAVGTPDYISPEVLKsqgGDGFYGR 313 kvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspew ++D+WS+Gv lye+l G +PF+ + + + ki+ +++ +pe+ KIAA0619 314 ECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMDHKNSLCFPED 358 dsisrsefrrlpnlseeakdLikkcLnkDPskRlt...aeeilqHPwf<- +is + ak Li+ L+ D + Rl++++ eei qHP+f KIAA0619 359 AEIS-----------KHAKNLICAFLT-DREVRLGrngVEEIRQHPFF 394 * KIAA0619 - - PF07714.7.fs: domain 2 of 2, from 192 to 335: score 27.8, E = 5.7e-08 *->iVrLlGvctkegePggpglyiVtEymegGdLldfLrkhregrpLtlk +V+L + + ++ ly+V+Eym+gGdL + + + ++ k KIAA0619 192 VVQLFYAFQD-DRY----LYMVMEYMPGGDLVNLMSNY----DVPEK 229 dLlsfalQiAkGMeYLesknfvHRDLAARNcLVsenlvVKIsDFGLaRdi + + +++ +++ +s++++HRD+ N L++++++ K +DFG + + KIAA0619 230 WAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 279 ynddyYvrkkgggk.lPvkWmAPEslkygk....FtskSDVWSFGVlLWE d++ ++ ++ +PE+lk +++ + + D WS GV L+E KIAA0619 280 --DETG-MVHCDTAvGTPDYISPEVLKSQGgdgfYGRECDWWSVGVFLYE 326 iftlGeqPFYp<-* ++ G++P ++ KIAA0619 327 MLV-GDTP-FY 335 PF00433.14.ls: domain 1 of 1, from 414 to 459: score 41.4, E = 2.9e-09 *->kvksptDTsNFDpeFTsepptltpppdsr.lssgkqleFrGFtYvnp +++s++D sNFD+ +++ +++t + ++++ g+ql+F+GFtY ++ KIAA0619 414 ELSSDIDSSNFDDIEDDKGDVET--FPIPkAFVGNQLPFIGFTYYRE 458 e<-* + KIAA0619 459 N 459 PF00433.14.fs: domain 1 of 1, from 414 to 459: score 39.4, E = 4e-11 *->kvksptDTsNFDpeFTsepptltpppdsr.lssgkqleFrGFtYvnp +++s++D sNFD+ +++ +++t + ++++ g+ql+F+GFtY ++ KIAA0619 414 ELSSDIDSSNFDDIEDDKGDVET--FPIPkAFVGNQLPFIGFTYYRE 458 e<-* + KIAA0619 459 N 459 PF02185.6.fs: domain 1 of 1, from 515 to 599: score 50.6, E = 3e-13 *->drleqLrkkievElkikeGAEnmlrlys.gKatkdrkvlqeaqqklr rle+ k++e+E +++ E+ lr+++++Ka ++k +++++ KIAA0619 515 TRLEKTAKELEEEITLRKSVESALRQLErEKALLQHKNAEYQRKADH 561 eSkqKR.LEN.ielLkeeLeelqlevqpsdpeneslee<-* e+++KR+LEN+++ Lk++Le+l++++q+s++++e++++ KIAA0619 562 EADKKRnLENdVNSLKDQLEDLKKRNQNSQISTEKVNQ 599 PF02185.6.ls: domain 1 of 1, from 515 to 599: score 52.6, E = 1.3e-12 *->drleqLrkkievElkikeGAEnmlrlys.gKatkdrkvlqeaqqklr rle+ k++e+E +++ E+ lr+++++Ka ++k +++++ KIAA0619 515 TRLEKTAKELEEEITLRKSVESALRQLErEKALLQHKNAEYQRKADH 561 eSkqKR.LEN.ielLkeeLeelqlevqpsdpeneslee<-* e+++KR+LEN+++ Lk++Le+l++++q+s++++e++++ KIAA0619 562 EADKKRnLENdVNSLKDQLEDLKKRNQNSQISTEKVNQ 599 PF08912.1.fs: domain 1 of 1, from 1018 to 1086: score 146.8, E = 5.4e-41 *->LtkDvanLanEkEELnnklKkaqeelqklKeeeqqinsiKaafEKqL Lt+DvanLanEkEELnnklK+ qe+l++lK+ee ++++iKa+fEKqL KIAA0619 1018 LTSDVANLANEKEELNNKLKDVQEQLSRLKDEEISAAAIKAQFEKQL 1064 qtErtLKtQAVNKLAEIMNRKd<-* tErtLKtQAVNKLAEIMNRK+ KIAA0619 1065 LTERTLKTQAVNKLAEIMNRKE 1086 PF08912.1.ls: domain 1 of 1, from 1018 to 1086: score 148.8, E = 1.4e-41 *->LtkDvanLanEkEELnnklKkaqeelqklKeeeqqinsiKaafEKqL Lt+DvanLanEkEELnnklK+ qe+l++lK+ee ++++iKa+fEKqL KIAA0619 1018 LTSDVANLANEKEELNNKLKDVQEQLSRLKDEEISAAAIKAQFEKQL 1064 qtErtLKtQAVNKLAEIMNRKd<-* tErtLKtQAVNKLAEIMNRK+ KIAA0619 1065 LTERTLKTQAVNKLAEIMNRKE 1086 PF00169.19.ls: domain 1 of 1, from 1191 to 1298: score 26.8, E = 6.9e-05 *->vikeGwLlkkg....gkkswkkRyfvLfddvLlyykdkk....kkpk eGwL++ ++++++k +w k y++++++++l+y++++++++++p KIAA0619 1191 SRLEGWLSLPVrnntKKFGWVKKYVIVSSKKILFYDSEQdkeqSNPY 1237 gsipLsgi.qvtkvpdn........krkncFeirt.dr....etlllqae ++++++++ v++v+ + + + ++ + +F+i ++++++++ ++ e KIAA0619 1238 MVLDIDKLfHVRPVTQTdvyradakEIPRIFQILYaNEgeskKEQEFPVE 1287 seeerkeWvkaiqsair<-* e+ ++ ++ KIAA0619 1288 PVGEKS------NYICH 1298 PF00169.19.fs: domain 1 of 2, from 1191 to 1275: score 28.9, E = 2.5e-08 *->vikeGwLlkkg....gkkswkkRyfvLfddvLlyykdkk....kkpk eGwL++ ++++++k +w k y++++++++l+y++++++++++p KIAA0619 1191 SRLEGWLSLPVrnntKKFGWVKKYVIVSSKKILFYDSEQdkeqSNPY 1237 gsipLsgi.qvtkvpdn........krkncFeirt.dr<-* ++++++++ v++v+ + + + ++ + +F+i ++ KIAA0619 1238 MVLDIDKLfHVRPVTQTdvyradakEIPRIFQILYaNE 1275 PF00130.12.fs: domain 1 of 1, from 1301 to 1343: score 23.7, E = 7.9e-06 *->HhFvhrwtfkqptfCdhCgeflwgslgk..qGlkCswCklnvHkr<- H F+++ + pt C+ C+++lw+ +k++++l C+ C+ ++Hk+ KIAA0619 1301 HEFIPT-LYHFPTNCEACMKPLWH-MFKppPALECRRCHIKCHKD 1343 * KIAA0619 - - PF00130.12.ls: domain 1 of 1, from 1301 to 1353: score 20.7, E = 9e-05 *->HhFvhrwtfkqptfCdhCgeflwgslgk..qGlkCswCklnvHkrCh H F+++ + pt C+ C+++lw+ +k++++l C+ C+ ++Hk+ KIAA0619 1301 HEFIPT-LYHFPTNCEACMKPLWH-MFKppPALECRRCHIKCHKD-- 1343 ekVppeCgcg<-* + ++e++ KIAA0619 1344 HMDKKEEIIA 1353 //