# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh01735.fasta.nr -Q ../query/KIAA0630.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0630, 490 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7821287 sequences Expectation_n fit: rho(ln(x))= 6.4172+/-0.000198; mu= 6.0089+/- 0.011 mean_var=110.9290+/-21.033, 0's: 34 Z-trim: 51 B-trim: 2 in 1/64 Lambda= 0.121773 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|56206714|emb|CAI22795.1| homeodomain interactin ( 816) 3196 572.3 1.6e-160 gi|20306937|gb|AAH28408.1| Homeodomain interacting ( 836) 3196 572.3 1.7e-160 gi|34395641|sp|Q86Z02.1|HIPK1_HUMAN RecName: Full= (1210) 3196 572.4 2.2e-160 gi|194380356|dbj|BAG63945.1| unnamed protein produ (1281) 3196 572.4 2.3e-160 gi|23273925|gb|AAH36057.1| Homeodomain interacting ( 816) 3191 571.4 3e-160 gi|21739284|emb|CAD38689.1| hypothetical protein [ ( 893) 3188 570.9 4.7e-160 gi|114558701|ref|XP_001151260.1| PREDICTED: homeod (1210) 3185 570.5 8.5e-160 gi|119576989|gb|EAW56585.1| homeodomain interactin ( 838) 3182 569.9 9.2e-160 gi|109014451|ref|XP_001111238.1| PREDICTED: homeod (1210) 3163 566.6 1.2e-158 gi|149708775|ref|XP_001499669.1| PREDICTED: simila (1210) 3128 560.5 8.8e-157 gi|194036437|ref|XP_001927205.1| PREDICTED: homeod ( 816) 3117 558.4 2.5e-156 gi|158508546|ref|NP_001103468.1| homeodomain inter (1210) 3094 554.5 5.5e-155 gi|73981048|ref|XP_856055.1| PREDICTED: similar to ( 815) 3074 550.9 4.6e-154 gi|73981044|ref|XP_533012.2| PREDICTED: similar to (1209) 3074 551.0 6.3e-154 gi|162770932|emb|CAP58493.1| homeodomain interacti (1176) 3069 550.1 1.1e-153 gi|162770931|emb|CAP58492.1| homeodomain interacti (1210) 3069 550.1 1.2e-153 gi|148675645|gb|EDL07592.1| homeodomain interactin ( 600) 3063 548.8 1.4e-153 gi|61252360|sp|O88904.2|HIPK1_MOUSE RecName: Full= (1210) 3063 549.1 2.4e-153 gi|149030441|gb|EDL85478.1| homeodomain interactin ( 536) 3046 545.8 1e-152 gi|114558705|ref|XP_001151205.1| PREDICTED: homeod (1136) 3049 546.6 1.3e-152 gi|56206713|emb|CAI22794.1| homeodomain interactin (1165) 3048 546.4 1.5e-152 gi|158508564|ref|NP_001094456.1| homeodomain inter (1211) 3046 546.1 1.9e-152 gi|134035221|gb|ABO47654.1| homeodomain-interactin (1177) 3039 544.8 4.4e-152 gi|3702956|gb|AAC63010.1| homeodomain-interacting (1209) 3039 544.8 4.5e-152 gi|158513576|sp|A4L9P5.1|HIPK1_RAT RecName: Full=H (1211) 3039 544.8 4.5e-152 gi|114558703|ref|XP_001151332.1| PREDICTED: homeod (1165) 3037 544.5 5.5e-152 gi|109014457|ref|XP_001111270.1| PREDICTED: homeod (1137) 3027 542.7 1.8e-151 gi|119576996|gb|EAW56592.1| homeodomain interactin ( 773) 3008 539.3 1.4e-150 gi|119576995|gb|EAW56591.1| homeodomain interactin ( 801) 3008 539.3 1.4e-150 gi|119576991|gb|EAW56587.1| homeodomain interactin ( 762) 2997 537.3 5.2e-150 gi|119576992|gb|EAW56588.1| homeodomain interactin ( 790) 2997 537.3 5.3e-150 gi|126311629|ref|XP_001382044.1| PREDICTED: simila (1284) 2977 534.0 8.9e-149 gi|73981056|ref|XP_856223.1| PREDICTED: similar to (1130) 2938 527.1 9.3e-147 gi|73981050|ref|XP_856095.1| PREDICTED: similar to (1136) 2926 525.0 4e-146 gi|73981054|ref|XP_856178.1| PREDICTED: similar to (1158) 2926 525.0 4.1e-146 gi|73981060|ref|XP_856305.1| PREDICTED: similar to (1164) 2926 525.0 4.1e-146 gi|73981058|ref|XP_856264.1| PREDICTED: similar to (1165) 2926 525.0 4.1e-146 gi|162770933|emb|CAP58494.1| homeodomain interacti (1165) 2921 524.1 7.6e-146 gi|5815143|gb|AAD52568.1|AF170303_1 nuclear body a (1165) 2915 523.1 1.6e-145 gi|149616152|ref|XP_001513212.1| PREDICTED: simila ( 568) 2718 488.2 2.3e-135 gi|119576990|gb|EAW56586.1| homeodomain interactin ( 846) 2698 484.8 3.7e-134 gi|118102503|ref|XP_418007.2| PREDICTED: similar t (1210) 2535 456.3 2e-125 gi|119576993|gb|EAW56589.1| homeodomain interactin ( 701) 2129 384.8 3.9e-104 gi|193784106|dbj|BAG53650.1| unnamed protein produ (1075) 2129 384.9 5.5e-104 gi|56206711|emb|CAI22792.1| homeodomain interactin (1075) 2129 384.9 5.5e-104 gi|114558707|ref|XP_001151138.1| PREDICTED: homeod (1075) 2118 383.0 2.1e-103 gi|21542514|gb|AAH33012.1| Homeodomain interacting (1075) 2118 383.0 2.1e-103 gi|109014454|ref|XP_001111126.1| PREDICTED: homeod (1075) 2096 379.1 3e-102 gi|197709168|gb|ACH72673.1| homeodomain interactin (1173) 2090 378.1 6.7e-102 gi|109014463|ref|XP_001111160.1| PREDICTED: homeod (1157) 2070 374.6 7.6e-101 >>gi|56206714|emb|CAI22795.1| homeodomain interacting pr (816 aa) initn: 3039 init1: 3039 opt: 3196 Z-score: 3037.9 bits: 572.3 E(): 1.6e-160 Smith-Waterman score: 3196; 99.796% identity (99.796% similar) in 491 aa overlap (1-490:326-816) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|562 QPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 300 310 320 330 340 350 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ 360 370 380 390 400 410 90 100 110 120 130 140 KIAA06 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV 420 430 440 450 460 470 150 160 170 180 190 200 KIAA06 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP 480 490 500 510 520 530 210 220 230 240 250 260 KIAA06 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP 540 550 560 570 580 590 270 280 290 300 310 320 KIAA06 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN 600 610 620 630 640 650 330 340 350 360 370 380 KIAA06 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA 660 670 680 690 700 710 390 400 410 420 430 440 KIAA06 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS 720 730 740 750 760 770 450 460 470 480 490 KIAA06 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::::::::::: gi|562 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 780 790 800 810 >>gi|20306937|gb|AAH28408.1| Homeodomain interacting pro (836 aa) initn: 3039 init1: 3039 opt: 3196 Z-score: 3037.8 bits: 572.3 E(): 1.7e-160 Smith-Waterman score: 3196; 99.796% identity (99.796% similar) in 491 aa overlap (1-490:346-836) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|203 QPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 320 330 340 350 360 370 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ 380 390 400 410 420 430 90 100 110 120 130 140 KIAA06 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV 440 450 460 470 480 490 150 160 170 180 190 200 KIAA06 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP 500 510 520 530 540 550 210 220 230 240 250 260 KIAA06 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP 560 570 580 590 600 610 270 280 290 300 310 320 KIAA06 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN 620 630 640 650 660 670 330 340 350 360 370 380 KIAA06 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA 680 690 700 710 720 730 390 400 410 420 430 440 KIAA06 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS 740 750 760 770 780 790 450 460 470 480 490 KIAA06 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::::::::::: gi|203 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 800 810 820 830 >>gi|34395641|sp|Q86Z02.1|HIPK1_HUMAN RecName: Full=Home (1210 aa) initn: 3039 init1: 3039 opt: 3196 Z-score: 3035.5 bits: 572.4 E(): 2.2e-160 Smith-Waterman score: 3196; 99.796% identity (99.796% similar) in 491 aa overlap (1-490:720-1210) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|343 QPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 690 700 710 720 730 740 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ 750 760 770 780 790 800 90 100 110 120 130 140 KIAA06 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV 810 820 830 840 850 860 150 160 170 180 190 200 KIAA06 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP 870 880 890 900 910 920 210 220 230 240 250 260 KIAA06 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP 930 940 950 960 970 980 270 280 290 300 310 320 KIAA06 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN 990 1000 1010 1020 1030 1040 330 340 350 360 370 380 KIAA06 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA 1050 1060 1070 1080 1090 1100 390 400 410 420 430 440 KIAA06 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS 1110 1120 1130 1140 1150 1160 450 460 470 480 490 KIAA06 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::::::::::: gi|343 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1170 1180 1190 1200 1210 >>gi|194380356|dbj|BAG63945.1| unnamed protein product [ (1281 aa) initn: 3039 init1: 3039 opt: 3196 Z-score: 3035.2 bits: 572.4 E(): 2.3e-160 Smith-Waterman score: 3196; 99.796% identity (99.796% similar) in 491 aa overlap (1-490:791-1281) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|194 QPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 770 780 790 800 810 820 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ 830 840 850 860 870 880 90 100 110 120 130 140 KIAA06 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV 890 900 910 920 930 940 150 160 170 180 190 200 KIAA06 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP 950 960 970 980 990 1000 210 220 230 240 250 260 KIAA06 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP 1010 1020 1030 1040 1050 1060 270 280 290 300 310 320 KIAA06 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN 1070 1080 1090 1100 1110 1120 330 340 350 360 370 380 KIAA06 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA 1130 1140 1150 1160 1170 1180 390 400 410 420 430 440 KIAA06 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS 1190 1200 1210 1220 1230 1240 450 460 470 480 490 KIAA06 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::::::::::: gi|194 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1250 1260 1270 1280 >>gi|23273925|gb|AAH36057.1| Homeodomain interacting pro (816 aa) initn: 3034 init1: 3034 opt: 3191 Z-score: 3033.2 bits: 571.4 E(): 3e-160 Smith-Waterman score: 3191; 99.593% identity (99.796% similar) in 491 aa overlap (1-490:326-816) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|232 QPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 300 310 320 330 340 350 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ 360 370 380 390 400 410 90 100 110 120 130 140 KIAA06 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV 420 430 440 450 460 470 150 160 170 180 190 200 KIAA06 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP 480 490 500 510 520 530 210 220 230 240 250 260 KIAA06 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP 540 550 560 570 580 590 270 280 290 300 310 320 KIAA06 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN 600 610 620 630 640 650 330 340 350 360 370 380 KIAA06 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 QQSSVAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA 660 670 680 690 700 710 390 400 410 420 430 440 KIAA06 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS 720 730 740 750 760 770 450 460 470 480 490 KIAA06 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::::::::::: gi|232 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 780 790 800 810 >>gi|21739284|emb|CAD38689.1| hypothetical protein [Homo (893 aa) initn: 3031 init1: 3031 opt: 3188 Z-score: 3029.8 bits: 570.9 E(): 4.7e-160 Smith-Waterman score: 3188; 99.593% identity (99.796% similar) in 491 aa overlap (1-490:403-893) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|217 QPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 380 390 400 410 420 430 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|217 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSYGNQYSTIMQQ 440 450 460 470 480 490 90 100 110 120 130 140 KIAA06 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV 500 510 520 530 540 550 150 160 170 180 190 200 KIAA06 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP 560 570 580 590 600 610 210 220 230 240 250 260 KIAA06 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP 620 630 640 650 660 670 270 280 290 300 310 320 KIAA06 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN 680 690 700 710 720 730 330 340 350 360 370 380 KIAA06 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA 740 750 760 770 780 790 390 400 410 420 430 440 KIAA06 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS 800 810 820 830 840 850 450 460 470 480 490 KIAA06 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::::::::::: gi|217 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 860 870 880 890 >>gi|114558701|ref|XP_001151260.1| PREDICTED: homeodomai (1210 aa) initn: 3028 init1: 3028 opt: 3185 Z-score: 3025.1 bits: 570.5 E(): 8.5e-160 Smith-Waterman score: 3185; 99.593% identity (99.593% similar) in 491 aa overlap (1-490:720-1210) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|114 QPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 690 700 710 720 730 740 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ 750 760 770 780 790 800 90 100 110 120 130 140 KIAA06 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV 810 820 830 840 850 860 150 160 170 180 190 200 KIAA06 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP 870 880 890 900 910 920 210 220 230 240 250 260 KIAA06 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP 930 940 950 960 970 980 270 280 290 300 310 320 KIAA06 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|114 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRRGTSAAQPLNLSQN 990 1000 1010 1020 1030 1040 330 340 350 360 370 380 KIAA06 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA 1050 1060 1070 1080 1090 1100 390 400 410 420 430 440 KIAA06 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS 1110 1120 1130 1140 1150 1160 450 460 470 480 490 KIAA06 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::::::::::: gi|114 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1170 1180 1190 1200 1210 >>gi|119576989|gb|EAW56585.1| homeodomain interacting pr (838 aa) initn: 2864 init1: 2698 opt: 3182 Z-score: 3024.5 bits: 569.9 E(): 9.2e-160 Smith-Waterman score: 3182; 99.391% identity (99.391% similar) in 493 aa overlap (1-490:346-838) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|119 QPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 320 330 340 350 360 370 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWR--NAHSHGNQYSTIM ::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|119 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRQVNAHSHGNQYSTIM 380 390 400 410 420 430 90 100 110 120 130 140 KIAA06 QQPSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QQPSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYS 440 450 460 470 480 490 150 160 170 180 190 200 KIAA06 LVGSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LVGSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGL 500 510 520 530 540 550 210 220 230 240 250 260 KIAA06 KPRSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KPRSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIV 560 570 580 590 600 610 270 280 290 300 310 320 KIAA06 PPLKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPLKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLS 620 630 640 650 660 670 330 340 350 360 370 380 KIAA06 QNQQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QNQQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPS 680 690 700 710 720 730 390 400 410 420 430 440 KIAA06 QAHLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QAHLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTS 740 750 760 770 780 790 450 460 470 480 490 KIAA06 ASVAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::::::::::::: gi|119 ASVAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 800 810 820 830 >>gi|109014451|ref|XP_001111238.1| PREDICTED: homeodomai (1210 aa) initn: 3006 init1: 3006 opt: 3163 Z-score: 3004.2 bits: 566.6 E(): 1.2e-158 Smith-Waterman score: 3163; 98.982% identity (99.389% similar) in 491 aa overlap (1-490:720-1210) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|109 QPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 690 700 710 720 730 740 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ 750 760 770 780 790 800 90 100 110 120 130 140 KIAA06 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV 810 820 830 840 850 860 150 160 170 180 190 200 KIAA06 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|109 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSSLKP 870 880 890 900 910 920 210 220 230 240 250 260 KIAA06 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|109 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGPVLEGPGRVVADGTGTRTIIVPP 930 940 950 960 970 980 270 280 290 300 310 320 KIAA06 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN ::::::::::::::::::::::::::::::::::: :::::::::::::.:::::::::: gi|109 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCSITPTGYRAQRGGTGAAQPLNLSQN 990 1000 1010 1020 1030 1040 330 340 350 360 370 380 KIAA06 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA 1050 1060 1070 1080 1090 1100 390 400 410 420 430 440 KIAA06 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS 1110 1120 1130 1140 1150 1160 450 460 470 480 490 KIAA06 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::::::::::: gi|109 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1170 1180 1190 1200 1210 >>gi|149708775|ref|XP_001499669.1| PREDICTED: similar to (1210 aa) initn: 2971 init1: 2971 opt: 3128 Z-score: 2971.0 bits: 560.5 E(): 8.8e-157 Smith-Waterman score: 3128; 97.352% identity (99.185% similar) in 491 aa overlap (1-490:720-1210) 10 20 KIAA06 TPQYAVPFTLSCAAGRPALVEQTAAVL-AW ::::::::::::::::::::::::::: :: gi|149 QPLQIQPGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAW 690 700 710 720 730 740 30 40 50 60 70 80 KIAA06 PGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQ :::::::::::::::::::::::::::::.:::::::::::::::.:::::::::::::: gi|149 PGGTQQILLPSTWQQLPGVALHNSVQPTAVIPEAMGSGQQLADWRSAHSHGNQYSTIMQQ 750 760 770 780 790 800 90 100 110 120 130 140 KIAA06 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLV :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|149 PSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQAAPVSSKSSLDVLPSQVYSLV 810 820 830 840 850 860 150 160 170 180 190 200 KIAA06 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKA 870 880 890 900 910 920 210 220 230 240 250 260 KIAA06 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPP ::::::::::::::::::::::::::::::::::::: .::::::::.:::::::::::: gi|149 RSNVISYVTVNDSPDSDSSLSSPYSTDTLSALRGNSGPLLEGPGRVVGDGTGTRTIIVPP 930 940 950 960 970 980 270 280 290 300 310 320 KIAA06 LKTQLGDCTVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|149 LKTQLGDCTVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQN 990 1000 1010 1020 1030 1040 330 340 350 360 370 380 KIAA06 QQSSAAPTSQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQA ::::.::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|149 QQSSSAPTSQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQP 1050 1060 1070 1080 1090 1100 390 400 410 420 430 440 KIAA06 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSAS 1110 1120 1130 1140 1150 1160 450 460 470 480 490 KIAA06 VAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::.:::::::::::::::::: gi|149 VAPAQYQHQFATQSYIGSSRGSAIYTGYPLSPTKISQYSYL 1170 1180 1190 1200 1210 490 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 11:04:32 2009 done: Thu Mar 5 11:08:35 2009 Total Scan time: 1473.460 Total Display time: 0.250 Function used was FASTA [version 34.26.5 April 26, 2007]