hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08361642/chunk_1/iprscan-20080502-08361642.nocrc
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Query sequence: KIAA0631
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00501.18.ls AMP-binding enzyme                          286.6    4.5e-83   1
PF00501.18.fs AMP-binding enzyme                          284.6    1.7e-82   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00501.18.fs   1/1     139   604 ..     1   377 []   284.6  1.7e-82
PF00501.18.ls   1/1     139   604 ..     1   377 []   286.6  4.5e-83

Alignments of top-scoring domains:
PF00501.18.fs: domain 1 of 1, from 139 to 604: score 284.6, E = 1.7e-82
                   *->TYrELderanrlAaaLralGvgpGdrVaillpnspelvvailAvlka
                      +Y + + +a+r A ++++lG+++   Vail  nspe+  +  +   a
    KIAA0631   139    SYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFA 185  

                   GaayvPldpsypaerlayiledsgakvlltddalla.l............
                   G+++  ++++ ++e+ +yi  d+ a v+ +d + + +   +  +  +  +
    KIAA0631   186 GGIVTGIYTTSSPEACQYIAYDCCANVIMVDTQKQLeKilkiwkqlphlk 235  

                   ................................s.e.p.ppvdpddlAyii
                   +++  +++++ + + + + ++  + + ++++++ +      +p++ +++ 
    KIAA0631   236 avviykepppnkmanvytmeefmelgnevpeeAlDaIiDTQQPNQCCVLV 285  

                   YTSGTTGkPKGVmltHrnlvnlvaala.rf.l.pdd..aervllllppll
                   YTSGTTG+PKGVml++ n+++ ++   +  +++p   + e+v ++lp l 
    KIAA0631   286 YTSGTTGNPKGVMLSQDNITWTARYGSqAGdIrPAEvqQEVVVSYLP-LS 334  

                   hfdgsvweifgpLlaGatlvlvpkfdryrdpealldliekykvTvlflvP
                   h+++ ++++++ +  Ga++++++++ +    + l+ ++++  +T  ++vP
    KIAA0631   335 HIAAQIYDLWTGIQWGAQVCFAEPDAL---KGSLVNTLREVEPTSHMGVP 381  

                   tllrlllkape...edlssLrlvlsgGealppelarrlrerfgs......
                   ++++ +++ +++   +   +r+ ++  + ++++l + l   + + ++ ++
    KIAA0631   382 RVWEKIMERIQevaAQSGFIRRKMLLWA-MSVTLEQNLTCPGSDlkpftt 430  

                   ........................................ggvrlvngYG
                   +  +     + +   +  +  ++  +  +    + +   + ++rl+ gYG
    KIAA0631   431 rladylvlakvrqalgfakcqknfygaapmmaetqhfflgLNIRLYAGYG 480  

                   pTEttvvatanppg.p.pgsiGrPlpgvevyvlDeegqpvppGevGELyi
                   ++Et++  +++ p + +  s G+ +pg++v++++++        +GE+++
    KIAA0631   481 LSETSGPHFMSSPYnYrLYSSGKLVPGCRVKLVNQD-----AEGIGEICL 525  

                   rGwpgvarGYlnrPelTaerFvadgwgpGeRmYrTGDlgrwdpDGyleil
                    G   +++GYln +++T e+++++gw      ++TGD gr+d+DG+l+i+
    KIAA0631   526 WG-RTIFMGYLNMEDKTCEAIDEEGW------LHTGDAGRLDADGFLYIT 568  

                   GRkDdqvKi.rGerIepgEiEavLl.ahPgVaeAaV<-*
                   GR++++++  +Ge++ p  iE+++  ++P + +A     
    KIAA0631   569 GRLKELIITaGGENVPPVPIEEAVKmELPIISNAML    604  

PF00501.18.ls: domain 1 of 1, from 139 to 604: score 286.6, E = 4.5e-83
                   *->TYrELderanrlAaaLralGvgpGdrVaillpnspelvvailAvlka
                      +Y + + +a+r A ++++lG+++   Vail  nspe+  +  +   a
    KIAA0631   139    SYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFA 185  

                   GaayvPldpsypaerlayiledsgakvlltddalla.l............
                   G+++  ++++ ++e+ +yi  d+ a v+ +d + + +   +  +  +  +
    KIAA0631   186 GGIVTGIYTTSSPEACQYIAYDCCANVIMVDTQKQLeKilkiwkqlphlk 235  

                   ................................s.e.p.ppvdpddlAyii
                   +++  +++++ + + + + ++  + + ++++++ +      +p++ +++ 
    KIAA0631   236 avviykepppnkmanvytmeefmelgnevpeeAlDaIiDTQQPNQCCVLV 285  

                   YTSGTTGkPKGVmltHrnlvnlvaala.rf.l.pdd..aervllllppll
                   YTSGTTG+PKGVml++ n+++ ++   +  +++p   + e+v ++lp l 
    KIAA0631   286 YTSGTTGNPKGVMLSQDNITWTARYGSqAGdIrPAEvqQEVVVSYLP-LS 334  

                   hfdgsvweifgpLlaGatlvlvpkfdryrdpealldliekykvTvlflvP
                   h+++ ++++++ +  Ga++++++++ +    + l+ ++++  +T  ++vP
    KIAA0631   335 HIAAQIYDLWTGIQWGAQVCFAEPDAL---KGSLVNTLREVEPTSHMGVP 381  

                   tllrlllkape...edlssLrlvlsgGealppelarrlrerfgs......
                   ++++ +++ +++   +   +r+ ++  + ++++l + l   + + ++ ++
    KIAA0631   382 RVWEKIMERIQevaAQSGFIRRKMLLWA-MSVTLEQNLTCPGSDlkpftt 430  

                   ........................................ggvrlvngYG
                   +  +     + +   +  +  ++  +  +    + +   + ++rl+ gYG
    KIAA0631   431 rladylvlakvrqalgfakcqknfygaapmmaetqhfflgLNIRLYAGYG 480  

                   pTEttvvatanppg.p.pgsiGrPlpgvevyvlDeegqpvppGevGELyi
                   ++Et++  +++ p + +  s G+ +pg++v++++++        +GE+++
    KIAA0631   481 LSETSGPHFMSSPYnYrLYSSGKLVPGCRVKLVNQD-----AEGIGEICL 525  

                   rGwpgvarGYlnrPelTaerFvadgwgpGeRmYrTGDlgrwdpDGyleil
                    G   +++GYln +++T e+++++gw      ++TGD gr+d+DG+l+i+
    KIAA0631   526 WG-RTIFMGYLNMEDKTCEAIDEEGW------LHTGDAGRLDADGFLYIT 568  

                   GRkDdqvKi.rGerIepgEiEavLl.ahPgVaeAaV<-*
                   GR++++++  +Ge++ p  iE+++  ++P + +A     
    KIAA0631   569 GRLKELIITaGGENVPPVPIEEAVKmELPIISNAML    604  

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