hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08512175/chunk_1/iprscan-20080502-08512175.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0640
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                  82.6    4.8e-20   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/1     229   326 ..     1    82 []    82.6  4.8e-20

Alignments of top-scoring domains:
SM00233: domain 1 of 1, from 229 to 326: score 82.6, E = 4.8e-20
                   *->vikeGwLlkks..k.swkkryfvLfngvLlyyksk...kpkgsipLs
                      v+k+G+++kk++++++w++r+fvL+++ ++yy s++ +++kg i L+
    KIAA0640   229    VLKQGYMMKKGhrRkNWTERWFVLKPNIISYYVSEdlkDKKGDILLD 275  

                   gcsvre.p........cFeivt.drtlllqAeseeereeWvealqsaiak
                   +  ++e+ +++++++  F +++ d+t++++A++++ ++eW++a++s i+ 
    KIAA0640   276 ENCCVEsLpdkdgkkcLFLVKCfDKTFEISASDKKKKQEWIQAIHSTIHL 325  

                   a<-*
                   +   
    KIAA0640   326 L    326  

//