hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09414130/chunk_1/iprscan-20080502-09414130.nocrc
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Query sequence: KIAA0669
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01166.9.fs TSC-22/dip/bun family                          110.4    4.1e-34   1
PF01166.9.ls TSC-22/dip/bun family                          112.4    1.2e-30   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01166.9.fs   1/1     739   799 ..     1    60 []   110.4  4.1e-34
PF01166.9.ls   1/1     739   799 ..     1    60 []   112.4  1.2e-30

Alignments of top-scoring domains:
PF01166.9.fs: domain 1 of 1, from 739 to 799: score 110.4, E = 4.1e-34
                   *->MDLVKsHLmyAVREEVEvLkeqIkeLveklnqLeeENtLLktnvSpE
                      MDLVKsHLmyAVREEVEvLkeqIkeLve+++ Le+EN LLk++ S  
    KIAA0669   739    MDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSND 785  

                   qLaql.qaqlqlae<-*
                   qL ql++ q  +++   
    KIAA0669   786 QLSQLpTQQANPGS    799  

PF01166.9.ls: domain 1 of 1, from 739 to 799: score 112.4, E = 1.2e-30
                   *->MDLVKsHLmyAVREEVEvLkeqIkeLveklnqLeeENtLLktnvSpE
                      MDLVKsHLmyAVREEVEvLkeqIkeLve+++ Le+EN LLk++ S  
    KIAA0669   739    MDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSND 785  

                   qLaql.qaqlqlae<-*
                   qL ql++ q  +++   
    KIAA0669   786 QLSQLpTQQANPGS    799  

//