hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09432395/chunk_1/iprscan-20080502-09432395.nocrc
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Query sequence: KIAA0670
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02037.17.fs SAP domain                                      43.6    4.3e-11   1
PF02037.17.ls SAP domain                                      45.7    1.5e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02037.17.fs   1/1      17    51 ..     1    35 []    43.6  4.3e-11
PF02037.17.ls   1/1      17    51 ..     1    35 []    45.7  1.5e-10

Alignments of top-scoring domains:
PF02037.17.fs: domain 1 of 1, from 17 to 51: score 43.6, E = 4.3e-11
                   *->lskLkVseLKeeLkkrGLstsGkKaeLveRLleal<-*
                      l++L+V++LK+ L++rGL++sG K+ Lv+RL+ al   
    KIAA0670    17    LQALRVTDLKAALEQRGLAKSGQKSALVKRLKGAL    51   

PF02037.17.ls: domain 1 of 1, from 17 to 51: score 45.7, E = 1.5e-10
                   *->lskLkVseLKeeLkkrGLstsGkKaeLveRLleal<-*
                      l++L+V++LK+ L++rGL++sG K+ Lv+RL+ al   
    KIAA0670    17    LQALRVTDLKAALEQRGLAKSGQKSALVKRLKGAL    51   

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