hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09585116/chunk_1/iprscan-20080502-09585116.nocrc
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Query sequence: KIAA0679
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF07555.3.fs    Hyaluronidase                           596.3   1.2e-186   1
PF07555.3.ls    Hyaluronidase                           598.1   7.4e-177   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF07555.3.fs      1/1      63   380 ..     1   340 []   596.3 1.2e-186
PF07555.3.ls      1/1      63   380 ..     1   340 []   598.1 7.4e-177

Alignments of top-scoring domains:
PF07555.3.fs: domain 1 of 1, from 63 to 380: score 596.3, E = 1.2e-186
                   *->RGvvEGFYGtPWShedRkdLikflgdnklNtYiYAPKDDpYhRekWR
                      +GvvEGFYG+PW +e+Rk+L+++l++++lNtY+YAPKDD++hR++WR
    KIAA0679    63    CGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWR 109  

                   ELYpeeeLkelkeLvavAaennvdFvYaIsPFlGlDitfssEeldeaDfd
                   E+Y +ee+++l++L+++A+e++++F+YaIsP  GlDitfs+    ++++ 
    KIAA0679   110 EMYSVEEAEQLMTLISAAREYEIEFIYAISP--GLDITFSN----PKEVS 153  

                   tLlaKleQlyslGVrsFaVLfDDIEyTKWNCkaqmsdadksdftsqAqaq
                   tL++Kl+Q++++G+rsFa+LfDDI++       +m++adk++f s+A+aq
    KIAA0679   154 TLKRKLDQVSQFGCRSFALLFDDIDH-------NMCAADKEVFSSFAHAQ 196  

                   vqLlNelqteLvsaksdvkelifcPteYyqsmavpnvksseYLktlgekl
                   v+++Ne++++L++++    +++fcPteY++++++pnv +s+YL+t gekl
    KIAA0679   197 VSITNEIYQYLGEPE----TFLFCPTEYCGTFCYPNVSQSPYLRTVGEKL 242  

                   dptIpimWTGprvWvsanitvediqfivtevpgRppliWDNwPvNDykkd
                    p I+++WTGp+v vs++i+ve+i++ v+++++R+p+iWDN+++NDy++ 
    KIAA0679   243 LPGIEVLWTGPKV-VSKEIPVESIEE-VSKIIKRAPVIWDNIHANDYDQ- 289  

                   kdRLlmGPydgrrdpgLdpslynvsGivsNPMnqaEaskvaiytlAdYaW
                    +RL++GPy+g r+++L+p+   ++G+++NP++++Ea++vai+tlA   W
    KIAA0679   290 -KRLFLGPYKG-RSTELIPR---LKGVLTNPNCEFEANYVAIHTLAT--W 332  

                   Nsady.......AsadywksWlssiekieggkaeetvatlllnafakhny
                   ++ ++++ +++ +++d ++s  s ++k+e++ ++e+++t++l  ++ ++ 
    KIAA0679   333 YKSNMngvrkdvVMTDSEDSTVSIQIKLENEGSDEDIETDVL--YSPQMA 380  

                   <-*
                      
    KIAA0679     -     -    

PF07555.3.ls: domain 1 of 1, from 63 to 380: score 598.1, E = 7.4e-177
                   *->RGvvEGFYGtPWShedRkdLikflgdnklNtYiYAPKDDpYhRekWR
                      +GvvEGFYG+PW +e+Rk+L+++l++++lNtY+YAPKDD++hR++WR
    KIAA0679    63    CGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWR 109  

                   ELYpeeeLkelkeLvavAaennvdFvYaIsPFlGlDitfssEeldeaDfd
                   E+Y +ee+++l++L+++A+e++++F+YaIsP  GlDitfs+    ++++ 
    KIAA0679   110 EMYSVEEAEQLMTLISAAREYEIEFIYAISP--GLDITFSN----PKEVS 153  

                   tLlaKleQlyslGVrsFaVLfDDIEyTKWNCkaqmsdadksdftsqAqaq
                   tL++Kl+Q++++G+rsFa+LfDDI++       +m++adk++f s+A+aq
    KIAA0679   154 TLKRKLDQVSQFGCRSFALLFDDIDH-------NMCAADKEVFSSFAHAQ 196  

                   vqLlNelqteLvsaksdvkelifcPteYyqsmavpnvksseYLktlgekl
                   v+++Ne++++L++++    +++fcPteY++++++pnv +s+YL+t gekl
    KIAA0679   197 VSITNEIYQYLGEPE----TFLFCPTEYCGTFCYPNVSQSPYLRTVGEKL 242  

                   dptIpimWTGprvWvsanitvediqfivtevpgRppliWDNwPvNDykkd
                    p I+++WTGp+v vs++i+ve+i++ v+++++R+p+iWDN+++NDy++ 
    KIAA0679   243 LPGIEVLWTGPKV-VSKEIPVESIEE-VSKIIKRAPVIWDNIHANDYDQ- 289  

                   kdRLlmGPydgrrdpgLdpslynvsGivsNPMnqaEaskvaiytlAdYaW
                    +RL++GPy+g r+++L+p+   ++G+++NP++++Ea++vai+tlA   W
    KIAA0679   290 -KRLFLGPYKG-RSTELIPR---LKGVLTNPNCEFEANYVAIHTLAT--W 332  

                   Nsady.......AsadywksWlssiekieggkaeetvatlllnafakhny
                   ++ ++++ +++ +++d ++s  s ++k+e++ ++e+++t++l  ++ ++ 
    KIAA0679   333 YKSNMngvrkdvVMTDSEDSTVSIQIKLENEGSDEDIETDVL--YSPQMA 380  

                   <-*
                      
    KIAA0679     -     -    

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