hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10003312/chunk_1/iprscan-20080502-10003312.nocrc
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Query sequence: KIAA0680
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00707                                                 167.4    1.4e-45   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00707    1/4      61    86 ..     1    26 []    39.9  3.5e-07
SM00707    2/4     478   503 ..     1    26 []    42.3  6.4e-08
SM00707    3/4     516   541 ..     1    26 []    44.4  1.5e-08
SM00707    4/4     554   579 ..     1    26 []    40.8  1.8e-07

Alignments of top-scoring domains:
SM00707: domain 1 of 4, from 61 to 86: score 39.9, E = 3.5e-07
                   *->drLkrKLsqRPtreELeernILkees<-*
                      ++L+rK+s+R++reEL++r++Lke++   
    KIAA0680    61    AVLERKISTRQSREELIRRGVLKELP    86   

SM00707: domain 2 of 4, from 478 to 503: score 42.3, E = 6.4e-08
                   *->drLkrKLsqRPtreELeernILkees<-*
                      d+L++KL +RP+++ELe++nIL+++s   
    KIAA0680   478    DTLAIKLGNRPSKKELEDKNILQRTS    503  

SM00707: domain 3 of 4, from 516 to 541: score 44.4, E = 1.5e-08
                   *->drLkrKLsqRPtreELeernILkees<-*
                       +L r+LsqRPt eELe+rnILk+++   
    KIAA0680   516    TKLVRRLSQRPTTEELEQRNILKQKN    541  

SM00707: domain 4 of 4, from 554 to 579: score 40.8, E = 1.8e-07
                   *->drLkrKLsqRPtreELeernILkees<-*
                      +rL+rKLs+RPt+ EL+ r+IL++++   
    KIAA0680   554    RRLSRKLSLRPTVAELQARRILRFNE    579  

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