HUGE

Gene/Protein Characteristic Table for KIAA0689

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK04662
Accession No. :	AB014589
Description :	Cleavage stimulation factor 64 kDa subunit, tau variant.
HUGO Gene Name :	cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant (CSTF2T)
Clone Name :	hk03417 [Vector Info]
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 3859 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Features of the protein sequence	Description

Length: 547 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAD96294	2.5e-160	100.0	cleavage stimul...	Homo sapiens
Q9H0L4	2.5e-160	100.0	Cleavage stimul...	Homo sapiens
AAH28239	3.5e-160	99.8	Cleavage stimul...	Homo sapiens
XP_001163035	2.9e-156	96.8	hypothetical pr...	Pan troglodytes
XP_001162992	3.9e-156	97.6	hypothetical pr...	Pan troglodytes

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR Description
: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: TCAGGTGATCTTACTATGGAG

Primer_r
: TAGGAAACATGGGAAAGTAGC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR	Description

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 10

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: TCAGGTGATCTTACTATGGAG
Primer_r	: TAGGAAACATGGGAAAGTAGC
PCR product length	: 222 bp
PCR conditions	: 95 °C15 sec62 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Gene/Protein Characteristic Table for KIAA0689

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information