hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-10253657/chunk_1/iprscan-20080502-10253657.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0695 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00182 259.1 3.6e-73 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00182 1/1 456 604 .. 1 159 [] 259.1 3.6e-73 Alignments of top-scoring domains: SM00182: domain 1 of 1, from 456 to 604: score 259.1, E = 3.6e-73 *->dkvlvlFkYiedKDVFekyYkkhLAKRLllnrSaSdDaEenmitkLK dk++++F++i KDVFe++Ykk+LAKRLl ++SaS+DaE++m++kLK KIAA0695 456 DKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 502 qecGyPaefTsKLegMFrDislSkdltqsFkdylannpgnaskksiDlsn ecG fTsKLegMF+D++lSkd++ Fk+y +n++ ++i+l+ KIAA0695 503 HECGA--AFTSKLEGMFKDMELSKDIMIQFKQYMQNQN---VPGNIELT- 546 vrVLtsgyWPtystekikveinLPqeLskaleeFeeFYlakhsGRkLtWl v++Lt gyWPty e++LP+e++k+ e+F++FYl khsGRkL W+ KIAA0695 547 VNILTMGYWPTYVP----MEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQ 592 hslgsgevkanf<-* lg++ +ka f KIAA0695 593 STLGHCVLKAEF 604 //