hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10271375/chunk_1/iprscan-20080502-10271375.nocrc
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Query sequence: KIAA0696
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                 246.3    2.5e-69   7
SM00256                                                  35.2      9e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00256    1/1     136   175 ..     1    41 []    35.2    9e-06
SM00320    1/7     237   274 ..     1    46 []    22.3     0.07
SM00320    2/7     277   314 ..     1    46 []    45.6  6.6e-09
SM00320    3/7     317   354 ..     1    46 []    34.6  1.4e-05
SM00320    4/7     360   397 ..     1    46 []    37.6  1.7e-06
SM00320    5/7     400   437 ..     1    46 []    38.9    7e-07
SM00320    6/7     440   477 ..     1    46 []    37.8  1.5e-06
SM00320    7/7     489   526 ..     1    46 []    29.6  0.00042

Alignments of top-scoring domains:
SM00256: domain 1 of 1, from 136 to 175: score 35.2, E = 9e-06
                   *->LPieileeIlskLdpkdllrlrkVsrkwrslidshdfwfkr<-*
                      L  +i e+Ils+Ld+++l+++ +V++ w ++i++  +w+k+   
    KIAA0696   136    LD-HIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKL    175  

SM00320: domain 1 of 7, from 237 to 274: score 22.3, E = 0.07
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      + + ++  +  ++  +V+++++++          ++sg +D++i++W
    KIAA0696   237    NlQRIQCRSENSK--GVYCLQYDDE--------KIISGLrDNSIKIW 273  

                   d<-*
                   d   
    KIAA0696   274 D    274  

SM00320: domain 2 of 7, from 277 to 314: score 45.6, E = 6.6e-09
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      + ++l++l+gHtg  +V++++++          ++++gs+D+t+r+W
    KIAA0696   277    SlECLKVLTGHTG--SVLCLQYDER--------VIVTGSsDSTVRVW 313  

                   d<-*
                   d   
    KIAA0696   314 D    314  

SM00320: domain 3 of 7, from 317 to 354: score 34.6, E = 1.4e-05
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t+++l tl  H+   +V++++fs          l++++s+D++i +W
    KIAA0696   317    TgEVLNTLIHHNE--AVLHLRFSNG--------LMVTCSkDRSIAVW 353  

                   d<-*
                   d   
    KIAA0696   354 D    354  

SM00320: domain 4 of 7, from 360 to 397: score 37.6, E = 1.7e-06
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      + +l r+l gH++  +V+ v+f++         +++s+s+D+ti++W
    KIAA0696   360    DiTLRRVLVGHRA--AVNVVDFDDK--------YIVSASgDRTIKVW 396  

                   d<-*
                   +   
    KIAA0696   397 S    397  

SM00320: domain 5 of 7, from 400 to 437: score 38.9, E = 7e-07
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t + +rtl+gH+   ++ ++++ +         l++sgs+D+tirlW
    KIAA0696   400    TcEFVRTLNGHKR--GIACLQYRDR--------LVVSGSsDNTIRLW 436  

                   d<-*
                   d   
    KIAA0696   437 D    437  

SM00320: domain 6 of 7, from 440 to 477: score 37.8, E = 1.5e-06
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       + +lr+l+gH+    V++++f+          +++sg  Dg+i++W
    KIAA0696   440    CgACLRVLEGHEE--LVRCIRFDNK--------RIVSGAyDGKIKVW 476  

                   d<-*
                   d   
    KIAA0696   477 D    477  

SM00320: domain 7 of 7, from 489 to 526: score 29.6, E = 0.00042
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++ +lrtl  H+g  +V  ++f+          +++s+s+D ti +W
    KIAA0696   489    StLCLRTLVEHSG--RVFRLQFDEF--------QIISSShDDTILIW 525  

                   d<-*
                   d   
    KIAA0696   526 D    526  

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