hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-10391809/chunk_1/iprscan-20080502-10391809.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0703 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00122.10.fs E1-E2 ATPase 356.9 5.5e-108 1 PF00122.10.ls E1-E2 ATPase 358.8 8e-105 1 PF00689.11.ls Cation transporting ATPase, C-terminu 154.5 2.6e-43 1 PF00689.11.fs Cation transporting ATPase, C-terminu 152.7 3.4e-43 1 PF00690.16.fs Cation transporter/ATPase, N-terminus 79.7 3.4e-22 1 PF00690.16.ls Cation transporter/ATPase, N-terminus 81.6 2.3e-21 1 PF00702.16.fs haloacid dehalogenase-like hydrolase 71.4 4.3e-20 2 PF00702.16.ls haloacid dehalogenase-like hydrolase 74.5 3e-19 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00690.16.fs 1/1 159 235 .. 1 87 [] 79.7 3.4e-22 PF00690.16.ls 1/1 159 235 .. 1 87 [] 81.6 2.3e-21 PF00122.10.ls 1/1 241 474 .. 1 245 [] 358.8 8e-105 PF00122.10.fs 1/1 241 474 .. 1 245 [] 356.9 5.5e-108 PF00702.16.ls 1/1 478 800 .. 1 183 [] 74.5 3e-19 PF00702.16.fs 2/2 649 800 .. 49 183 .] 67.0 7.9e-19 PF00689.11.fs 1/1 896 1037 .. 1 197 [] 152.7 3.4e-43 PF00689.11.ls 1/1 896 1037 .. 1 197 [] 154.5 2.6e-43 Alignments of top-scoring domains: PF00690.16.fs: domain 1 of 1, from 159 to 235: score 79.7, E = 3.4e-22 *->eelkkevdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpNe ++l +++ +l+++ +++d+ +GLs+ +++R+ +G+Ne KIAA0703 159 SFLAAPMS----ELVPDLS---FQVDLHTGLSEFSVTQRRLAHGWNE 198 LppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* + ++ +++ w+k+L+QFk+pl+llLl++A++S ++ KIAA0703 199 FVADNSEPVWKKYLDQFKNPLILLLLGSALVS---VLTKE 235 PF00690.16.ls: domain 1 of 1, from 159 to 235: score 81.6, E = 2.3e-21 *->eelkkevdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpNe ++l +++ +l+++ +++d+ +GLs+ +++R+ +G+Ne KIAA0703 159 SFLAAPMS----ELVPDLS---FQVDLHTGLSEFSVTQRRLAHGWNE 198 LppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* + ++ +++ w+k+L+QFk+pl+llLl++A++S ++ KIAA0703 199 FVADNSEPVWKKYLDQFKNPLILLLLGSALVS---VLTKE 235 PF00122.10.ls: domain 1 of 1, from 241 to 474: score 358.8, E = 8e-105 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdGgkeeei i++ vl++ t+ f+qe+r+ek+le+L klvpp+++ lR+G k++++ KIAA0703 241 SIATAVLVVVTVAFIQEYRSEKSLEELTKLVPPECNCLREG-KLQHL 286 paeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlPVeKhs a+eLvpGD+V +++Gdr+PAD+r++e ++ L VDES+ TGE++P +K++ KIAA0703 287 LARELVPGDVVSLSIGDRIPADIRLTEVTD-LLVDESSFTGEAEPCSKTD 335 dvvtpdnp.lergnmVfaGTlvvsGsltgvVtatGddTflgkIakLVeeA ++t++ + + n+Vf+GTlv+ G+++gvV++tG+ +++g + k+++ KIAA0703 336 SPLTGGGDlTTLSNIVFMGTLVQYGRGQGVVIGTGESSQFGEVFKMMQAE 385 qssktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswlegl +++ktPlQ+ +d++gk+lt+++++++ l+ +i++ + g+ +l KIAA0703 386 ETPKTPLQKSMDRLGKQLTLFSFGIIGLIMLIGWSQ------GKQLLS-- 427 lyalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpAvEt< +++++v+l+VaA+PegLp+vv+v+l+lG+ rmAkk ++VK+lp vEt KIAA0703 428 --MFTIGVSLAVAAIPEGLPIVVMVTLVLGVLRMAKKRVIVKKLPIVET 474 -* KIAA0703 - - PF00122.10.fs: domain 1 of 1, from 241 to 474: score 356.9, E = 5.5e-108 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdGgkeeei i++ vl++ t+ f+qe+r+ek+le+L klvpp+++ lR+G k++++ KIAA0703 241 SIATAVLVVVTVAFIQEYRSEKSLEELTKLVPPECNCLREG-KLQHL 286 paeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlPVeKhs a+eLvpGD+V +++Gdr+PAD+r++e ++ L VDES+ TGE++P +K++ KIAA0703 287 LARELVPGDVVSLSIGDRIPADIRLTEVTD-LLVDESSFTGEAEPCSKTD 335 dvvtpdnp.lergnmVfaGTlvvsGsltgvVtatGddTflgkIakLVeeA ++t++ + + n+Vf+GTlv+ G+++gvV++tG+ +++g + k+++ KIAA0703 336 SPLTGGGDlTTLSNIVFMGTLVQYGRGQGVVIGTGESSQFGEVFKMMQAE 385 qssktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswlegl +++ktPlQ+ +d++gk+lt+++++++ l+ +i++ + g+ +l KIAA0703 386 ETPKTPLQKSMDRLGKQLTLFSFGIIGLIMLIGWSQ------GKQLLS-- 427 lyalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpAvEt< +++++v+l+VaA+PegLp+vv+v+l+lG+ rmAkk ++VK+lp vEt KIAA0703 428 --MFTIGVSLAVAAIPEGLPIVVMVTLVLGVLRMAKKRVIVKKLPIVET 474 -* KIAA0703 - - PF00702.16.ls: domain 1 of 1, from 478 to 800: score 74.5, E = 3e-19 *->ikavvFDkDGTLtdgkeppiaeaiveaaaelgl.............l + +++ Dk+GTLt e +++ + + + ++ +++ + +++++ l KIAA0703 478 CSVLCSDKTGTLTAN-EMTVTQLVTSDGLRAEVsgvgydgqgtvclL 523 pleevekllgrgl.gerilleggltaell..................... p +ev k + g +l e+g++a ++ +++ + ++++ KIAA0703 524 PSKEVIKEFSNVSvG--KLVEAGCVANNAvirknavmgqptegalmalam 571 .................................................. + + ++ +++ ++++ + +++ + + + ++++ ++ ++ ++ KIAA0703 572 kmdlsdiknsyirkkeipfsseqkwmavkcslktedqediyfmkgaleev 621 ................................................d. + + ++++ + + ++ ++ ++++ ++ + + ++++ ++ KIAA0703 622 iryctmynnggiplpltpqqrsfclqeekrmgslglrvlalasgpelgRl 671 evlglial.dklypgarealkaLkrrGikvailTggdr.naealle.... +lgl+ d+++ g++ea++ L + G+ v ++Tg+ ++a a++++ + KIAA0703 672 TFLGLVGIiDPPRVGVKEAVQVLSESGVSVKMITGDALeTALAIGRnigl 721 ......algla.lfdviidsdevggv.gpivvgKPkpeifllalerlgvk +++ +a+ ++++d ++ ++ +++v+ v+ + +p+ +l+++++l+ + KIAA0703 722 cngklqAMS-GeEVDSVEKGELADRVgKVSVFFRTSPKHKLKIIKALQES 770 peevgpevlmVGDgvnDapalaaAGvgvamgngg<-* ++ v +m GDgvnDa+al++A++g+amg +g KIAA0703 771 GAIV----AMTGDGVNDAVALKSADIGIAMGQTG 800 PF00702.16.fs: domain 2 of 2, from 649 to 800: score 67.0, E = 7.9e-19 *->erilleggltaell.......d.evlglial.dklypgarealkaLk e+++++ gl+ ++l ++++ ++ +lgl+ d+++ g++ea++ L KIAA0703 649 EKRMGSLGLRVLALasgpelgRlTFLGLVGIiDPPRVGVKEAVQVLS 695 rrGikvailTggdr.naealle..........algla.lfdviidsdevg + G+ v ++Tg+ ++a a++++ + +++ +a+ ++++d ++ ++ ++ KIAA0703 696 ESGVSVKMITGDALeTALAIGRniglcngklqAMS-GeEVDSVEKGELAD 744 gv.gpivvgKPkpeifllalerlgvkpeevgpevlmVGDgvnDapalaaA +v+ v+ + +p+ +l+++++l+ +++ v +m GDgvnDa+al++A KIAA0703 745 RVgKVSVFFRTSPKHKLKIIKALQESGAIV----AMTGDGVNDAVALKSA 790 Gvgvamgngg<-* ++g+amg +g KIAA0703 791 DIGIAMGQTG 800 PF00689.11.fs: domain 1 of 1, from 896 to 1037: score 152.7, E = 3.4e-43 *->RpPRnpkDeliitgllffrylviGvivavatlaaFvwwfygggenGi +pPR+ + i+++ l++++l ++i+ +tl++F+ ++ + KIAA0703 896 QPPRSVR-DTILSRALILKILMSAAIIISGTLFIFWKEMPED----- 936 dfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFtv ++ ++r tTm+Ft+ KIAA0703 937 ---------------------------------RAS---TPRTTTMTFTC 950 lVviqmfNAWEalncrsefFmhPldrnSlfqmgplwrNkwLllAvvlsla +V++++fN al+crs+ ++ +f++g+ +rN+++l++v +s++ KIAA0703 951 FVFFDLFN---ALTCRSQ-------TKLIFEIGF-LRNHMFLYSVLGSIL 989 lqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRrr +ql ++Y+P+lq++Fqt+ l + ++l++ +++++vfil E++K+ + KIAA0703 990 GQLAVIYIPPLQRVFQTENL-GALDLLFLTGLASSVFILSELLKLCEK-Y 1037 <-* KIAA0703 - - PF00689.11.ls: domain 1 of 1, from 896 to 1037: score 154.5, E = 2.6e-43 *->RpPRnpkDeliitgllffrylviGvivavatlaaFvwwfygggenGi +pPR+ + i+++ l++++l ++i+ +tl++F+ ++ + KIAA0703 896 QPPRSVR-DTILSRALILKILMSAAIIISGTLFIFWKEMPED----- 936 dfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFtv ++ ++r tTm+Ft+ KIAA0703 937 ---------------------------------RAS---TPRTTTMTFTC 950 lVviqmfNAWEalncrsefFmhPldrnSlfqmgplwrNkwLllAvvlsla +V++++fN al+crs+ ++ +f++g+ +rN+++l++v +s++ KIAA0703 951 FVFFDLFN---ALTCRSQ-------TKLIFEIGF-LRNHMFLYSVLGSIL 989 lqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRrr +ql ++Y+P+lq++Fqt+ l + ++l++ +++++vfil E++K+ + KIAA0703 990 GQLAVIYIPPLQRVFQTENL-GALDLLFLTGLASSVFILSELLKLCEK-Y 1037 <-* KIAA0703 - - //