hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10442013/chunk_1/iprscan-20080502-10442013.nocrc
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Query sequence: KIAA0706
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00129                                                 599.9   8.9e-176   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00129     1/1      23   376 ..     1   404 []   599.9 8.9e-176

Alignments of top-scoring domains:
SM00129: domain 1 of 1, from 23 to 376: score 599.9, E = 8.9e-176
                   *->kgnIrVavRvdrdRPlnkrEksekakeespsvvtv....tvtvn...
                        +++VavRv   RP+n rE+s      +++vv++++++t ++n+++
    KIAA0706    23    GASVKVAVRV---RPFNARETSQD----AKCVVSMqgntTSIINpkq 62   

                   .......FtFDkVFW......rydvddpsasQedVFeevaaPLvdsaldG
                   +++ +++FtFD+++W++++++     +++asQ++V+++++ +++ +a++G
    KIAA0706    63 skdapksFTFDYSYWshtsteD----PQFASQQQVYRDIGEEMLLHAFEG 108  

                   YNvaTIFAYGQTGSGKTyTMsGtptdpgilsndladitpdepGiIPRale
                   YNv +IFAYGQTG+GK+yTM+G                p ++Gi P  +e
    KIAA0706   109 YNV-CIFAYGQTGAGKSYTMMGRQ-------------EPGQQGIVPQLCE 144  

                   dlFekide.......fsVkvSylEIYNEkirDLLspspenSksrGkhakq
                   dlF ++ e+++ + ++sV+vSy+EIY+E++rDLL+p++            
    KIAA0706   145 DLFSRVSEnqsaqlsYSVEVSYMEIYCERVRDLLNPKS------------ 182  

                   sskkkLrirEdkngnrhdapkLtrlrgqggvyVvGLtevsVsSaeevlel
                     ++ Lr+rE++                 g+yV++L+   V+S++++ +l
    KIAA0706   183 --RGSLRVREHPI---------------LGPYVQDLSKLAVTSYADIADL 215  

                   lerGnknRtvaaTkmNeeSSRSHaiFtitleqkeklepiadektesstne
                   ++ Gnk RtvaaT+mNe SSRSHa+Fti+ +q+           ++ +  
    KIAA0706   216 MDCGNKARTVAATNMNETSSRSHAVFTIVFTQR-----------CHDQLT 254  

                   gteqiksskLnLVDLAGSERaskTgseaeGdRLkEaqnINkSLlaLGnVI
                   g ++ k+sk++LVDLAGSERa+++g  a+G RLkE++nINkSL++LG+VI
    KIAA0706   255 GLDSEKVSKISLVDLAGSERADSSG--ARGMRLKEGANINKSLTTLGKVI 302  

                   nALaddshdsaeseatkqaggkssHIPYRDSKLTrLLQdSLGGNsKTlMI
                   +ALad           +++++ks +IPYRDS+LT+LL++ LGGNs+T+MI
    KIAA0706   303 SALAD----------MQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMI 342  

                   anvSPsssnyeETlsTLrFAsRaksIknkpavne<-*
                   a +SP+++nyeETlsTLr+A+R k+I++++++ne   
    KIAA0706   343 AALSPADINYEETLSTLRYADRTKQIRCNAIINE    376  

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