hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10511197/chunk_1/iprscan-20080502-10511197.nocrc
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Query sequence: KIAA0710
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
SM00479                                                  84.3    1.4e-20   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
SM00479       1/1     977  1160 ..     1   196 []    84.3  1.4e-20

Alignments of top-scoring domains:
SM00479: domain 1 of 1, from 977 to 1160: score 84.3, E = 1.4e-20
                   *->tlvviDcEtTGpdne.geldpg..........deiiEiaaVdvdg..
                      +lv +D E++ +  e+ el  ++++++ ++++  +++i++V+ +g++
    KIAA0710   977    DLVGLDAEFVTLNEEeAELRSDgtkstikpsqMSVARITCVRGQGpn 1023 

                   ...evfdtlVkPddrpipdyateihGSIteemlddgrsaaptfe......
                   ++    d ++    ++++dy t+++G I++ +ld     +++ ++ ++ +
    KIAA0710  1024 egiPFIDDYIST-QEQVVDYLTQYSG-IKPGDLDA----KISSKhlttlk 1067 

                   eVleelleflkgsippgkegvclvagNsanfDlrfLklehprlglkeppk
                     + +l+ +++ ++         ++g+++  D+r+++l++p+        
    KIAA0710  1068 STYLKLRFLIDIGV--------KFVGHGLQKDFRVINLMVPK-------- 1101 

                   npflviDTadlaktlklarklfpglpkagrrkysLkkLaerlgleviq..
                     ++v+DT      + l++  +        r+ sL++La++++   iq++
    KIAA0710  1102 --DQVLDT------VYLFHMPRK-------RMISLRFLAWYFLDLKIQge 1136 

                   .HrAldDArataklfkkllerlae<-*
                   +H++++DAr++++l++k+le  ++   
    KIAA0710  1137 tHDSIEDARTALQLYRKYLELSKN    1160 

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