hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11170314/chunk_1/iprscan-20080502-11170314.nocrc
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Query sequence: KIAA0725
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02862.8.ls DDHD domain                                    370.9   1.9e-108   1
PF02862.8.fs DDHD domain                                    369.1   6.4e-108   1
PF00536.20.fs SAM domain (Sterile alpha motif)                38.2    1.3e-10   1
PF00536.20.ls SAM domain (Sterile alpha motif)                40.2    6.8e-09   1
PF07647.7.fs SAM domain (Sterile alpha motif)                22.9    4.7e-06   1
PF07647.7.ls SAM domain (Sterile alpha motif)                23.0    0.00099   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07647.7.fs   1/1     244   301 ..     1    64 [.    22.9  4.7e-06
PF07647.7.ls   1/1     244   309 ..     1    72 []    23.0  0.00099
PF00536.20.ls   1/1     245   307 ..     1    65 []    40.2  6.8e-09
PF00536.20.fs   1/1     245   307 ..     1    65 []    38.2  1.3e-10
PF02862.8.fs   1/1     357   562 ..     1   276 []   369.1 6.4e-108
PF02862.8.ls   1/1     357   562 ..     1   276 []   370.9 1.9e-108

Alignments of top-scoring domains:
PF07647.7.fs: domain 1 of 1, from 244 to 301: score 22.9, E = 4.7e-06
                   *->veswslesvaeWLesiglegqYkdnFsdqgitglellllrlteedLa
                      +++ +++++ e L+++ l  ++ d+F++ +++  e+l +  t  dL 
    KIAA0725   244    MDQGDTPTLEEDLKKLQL-SEFFDIFEKEKVDK-EAL-ALCTDRDL- 286  

                   klalGitsvghRkkilk<-*
                   + ++Gi  +g+Rkkil+   
    KIAA0725   287 Q-EIGI-PLGPRKKILN    301  

PF07647.7.ls: domain 1 of 1, from 244 to 309: score 23.0, E = 0.00099
                   *->veswslesvaeWLesiglegqYkdnFsdqgitglellllrlteedLa
                      +++ +++++ e L+++ l  ++ d+F++ +++  e+l +  t  dL 
    KIAA0725   244    MDQGDTPTLEEDLKKLQL-SEFFDIFEKEKVDK-EAL-ALCTDRDL- 286  

                   klalGitsvghRkkilkkiqelkqq<-*
                   + ++Gi  +g+Rkkil+ +   k +   
    KIAA0725   287 Q-EIGI-PLGPRKKILNYFSTRKNS    309  

PF00536.20.ls: domain 1 of 1, from 245 to 307: score 40.2, E = 6.8e-09
                   *->dgwsfesVgeWLesiglgqYidnFlsagyidgdtllqlteeDLedlG
                      d+ +  ++ e L+++ l++  d F +++++d ++l+++t+ DL+++G
    KIAA0725   245    DQGDTPTLEEDLKKLQLSEFFDIF-EKEKVDKEALALCTDRDLQEIG 290  

                   vtllGHrkKIlssIqgLk<-*
                   +  lG+rkKIl+   + k   
    KIAA0725   291 I-PLGPRKKILNYFSTRK    307  

PF00536.20.fs: domain 1 of 1, from 245 to 307: score 38.2, E = 1.3e-10
                   *->dgwsfesVgeWLesiglgqYidnFlsagyidgdtllqlteeDLedlG
                      d+ +  ++ e L+++ l++  d F +++++d ++l+++t+ DL+++G
    KIAA0725   245    DQGDTPTLEEDLKKLQLSEFFDIF-EKEKVDKEALALCTDRDLQEIG 290  

                   vtllGHrkKIlssIqgLk<-*
                   +  lG+rkKIl+   + k   
    KIAA0725   291 I-PLGPRKKILNYFSTRK    307  

PF02862.8.fs: domain 1 of 1, from 357 to 562: score 369.1, E = 6.4e-108
                   *->LdFkvenfFaiGSPlGlfltlRglkiGDRPEFPngdslDllvsrpaC
                      L++k+e+fFa+GSP+G+flt+Rg            +++D+++++p+C
    KIAA0725   357    LIYKPEIFFAFGSPIGMFLTVRG-----------LKRIDPNYRFPTC 392  

                   kqfYNIFHPlDPvAYRLEPLvvpefsKhikPvkIphykgrkrLglelsep
                   k+f+NI+HP+DPvAYR+EP+vvp ++  ++P++Iph+kgrkr++lel+e+
    KIAA0725   393 KGFFNIYHPFDPVAYRIEPMVVPGVE--FEPMLIPHHKGRKRMHLELREG 440  

                   ltrviadlpqnflsnlqssiksspvltsasgasrkneeeteevkestars
                   ltr+++dl++n+l +l++++ks   +t+a++++ +++e++ee++++    
    KIAA0725   441 LTRMSMDLKNNLLGSLRMAWKS---FTRAPYPALQASETPEETEAE---- 483  

                   GCSPRmTpapeqtenltemliareeravesqpssfgrsSiektkStaslg
                               +e+++e+  +++++++e+                    
    KIAA0725   484 ------------PESTSEK--PSDVNTEET-------------------- 499  

                   svnktvaenietapeaskeedlaikvlmskLngtkRIDYvLqePaallaf
                                ++a+kee+l+i+v  ++Lng++RIDYvLqe +++++f
    KIAA0725   500 -------------SVAVKEEVLPINV--GMLNGGQRIDYVLQE-KPIESF 533  

                   nsYlsalksHasYWeSeDvAlFlLkeiyr<-*
                   n+Yl+al+sH++YWeSeD++l++Lkeiy+   
    KIAA0725   534 NEYLFALQSHLCYWESEDTVLLVLKEIYQ    562  

PF02862.8.ls: domain 1 of 1, from 357 to 562: score 370.9, E = 1.9e-108
                   *->LdFkvenfFaiGSPlGlfltlRglkiGDRPEFPngdslDllvsrpaC
                      L++k+e+fFa+GSP+G+flt+Rg            +++D+++++p+C
    KIAA0725   357    LIYKPEIFFAFGSPIGMFLTVRG-----------LKRIDPNYRFPTC 392  

                   kqfYNIFHPlDPvAYRLEPLvvpefsKhikPvkIphykgrkrLglelsep
                   k+f+NI+HP+DPvAYR+EP+vvp ++  ++P++Iph+kgrkr++lel+e+
    KIAA0725   393 KGFFNIYHPFDPVAYRIEPMVVPGVE--FEPMLIPHHKGRKRMHLELREG 440  

                   ltrviadlpqnflsnlqssiksspvltsasgasrkneeeteevkestars
                   ltr+++dl++n+l +l++++ks   +t+a++++ +++e++ee++++    
    KIAA0725   441 LTRMSMDLKNNLLGSLRMAWKS---FTRAPYPALQASETPEETEAE---- 483  

                   GCSPRmTpapeqtenltemliareeravesqpssfgrsSiektkStaslg
                               +e+++e+  +++++++e+                    
    KIAA0725   484 ------------PESTSEK--PSDVNTEET-------------------- 499  

                   svnktvaenietapeaskeedlaikvlmskLngtkRIDYvLqePaallaf
                                ++a+kee+l+i+v  ++Lng++RIDYvLqe +++++f
    KIAA0725   500 -------------SVAVKEEVLPINV--GMLNGGQRIDYVLQE-KPIESF 533  

                   nsYlsalksHasYWeSeDvAlFlLkeiyr<-*
                   n+Yl+al+sH++YWeSeD++l++Lkeiy+   
    KIAA0725   534 NEYLFALQSHLCYWESEDTVLLVLKEIYQ    562  

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