hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11305313/chunk_1/iprscan-20080502-11305313.nocrc
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Query sequence: KIAA0733
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02845.6.fs CUE domain                                      51.2    1.5e-13   1
PF02845.6.ls CUE domain                                      53.2    7.9e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02845.6.fs   1/1      13    55 ..     1    43 []    51.2  1.5e-13
PF02845.6.ls   1/1      13    55 ..     1    43 []    53.2  7.9e-13

Alignments of top-scoring domains:
PF02845.6.fs: domain 1 of 1, from 13 to 55: score 51.2, E = 1.5e-13
                   *->vneealhelkemFPqldksvIravLeantgnveatinnLLegs<-*
                      +  ++lh+l++ FP+++++v+++++++n++n++a++++L ++s   
    KIAA0733    13    IDFQVLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVLSQES    55   

PF02845.6.ls: domain 1 of 1, from 13 to 55: score 53.2, E = 7.9e-13
                   *->vneealhelkemFPqldksvIravLeantgnveatinnLLegs<-*
                      +  ++lh+l++ FP+++++v+++++++n++n++a++++L ++s   
    KIAA0733    13    IDFQVLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVLSQES    55   

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