hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12095879/chunk_1/iprscan-20080502-12095879.nocrc
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Query sequence: KIAA0756
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00409                                                 239.1    3.8e-67   6
SM00408                                                 230.1    1.8e-64   6
SM00060                                                 153.0    3.1e-41   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00409    1/6      95   184 ..     1    58 []    14.7      4.3
SM00408    1/6     101   172 ..     1    56 []    19.5    0.051
SM00409    2/6     194   281 ..     1    58 []    40.2  2.9e-07
SM00408    2/6     200   267 ..     1    56 []     7.4     0.94
SM00409    3/6     317   398 ..     1    58 []    57.6  1.6e-12
SM00408    3/6     323   387 ..     1    56 []    74.0  1.8e-17
SM00409    4/6     407   490 ..     1    58 []    32.6  5.4e-05
SM00408    4/6     413   479 ..     1    56 []    44.0  1.9e-08
SM00409    5/6     501   583 ..     1    58 []    40.0  3.3e-07
SM00408    5/6     507   572 ..     1    56 []    50.2  2.7e-10
SM00409    6/6     592   674 ..     1    58 []    54.1  1.8e-11
SM00408    6/6     598   663 ..     1    56 []    35.0    1e-05
SM00060    1/4     677   760 ..     1    69 []    51.8  8.7e-11
SM00060    2/4     777   859 ..     1    69 []    35.6  6.8e-06
SM00060    3/4     875   966 ..     1    69 []    28.9  0.00072
SM00060    4/4     981  1065 ..     1    69 []    36.7  3.1e-06

Alignments of top-scoring domains:
SM00409: domain 1 of 6, from 95 to 184: score 14.7, E = 4.3
                   *->pp.vtvkeGesvtLtC.as.....titWy..................
                       +++ v + +++ ++C+a++++ ++++W+++++  +  ++++ + ++
    KIAA0756    95    AKdHIVDPRDNILIECeAKgnpapSFHWTrnsrffniakdprvsmrr 141  

                   ....LtInvtpeDse.....sgGtYtCaat..sgsasseqgttLtVl<-*
                   ++++L+I+ +    +++++ + G+Y+C a+++ g+a s + ++L+V+   
    KIAA0756   142 rsgtLVIDFRSG--GrpeeyE-GEYQCFARnkFGTALS-NRIRLQVS    184  

SM00408: domain 1 of 6, from 101 to 172: score 19.5, E = 0.051
                   *->leGqsVtLtCpasgdpvpnItWlk.gkplp...........sgstLt
                       + +++ ++C+a g+p+p+++W++++   +  ++++ + ++ ++tL 
    KIAA0756   101    DPRDNILIECEAKGNPAPSFHWTRnSRFFNiakdprvsmrrRSGTLV 147  

                   i...knvs.leDsGlYtCvArNsvg<-*
                   i+ ++  +++e +G+Y+C+ArN+ g   
    KIAA0756   148 IdfrSGGRpEEYEGEYQCFARNKFG    172  

SM00409: domain 2 of 6, from 194 to 281: score 40.2, E = 2.9e-07
                   *->pp.vtvkeGesvtLtC.as......titWy.................
                        +v+v+eG ++tL+C+ +++ +++ i+W++++  + +++++ ++++
    KIAA0756   194    LDpVVVQEGAPLTLQCnPPpglpspVIFWMsssmepitqdkrvsqgh 240  

                   ...LtI.nvtpeDsesgGtYtCaat....sgsasseqgttLtVl<-*
                   +++L ++nv ++D +   +Y C a+ + ++  +++ +++tL+Vl   
    KIAA0756   241 ngdLYFsNVMLQDMQ--TDYSCNARfhftHTIQQK-NPFTLKVL    281  

SM00408: domain 2 of 6, from 200 to 267: score 7.4, E = 0.94
                   *->leGqsVtLtCp.asgdpvpnItWlk..gkplp........sgstLti
                      +eG ++tL+C +  g p p I W  ++ +p+ ++++ ++++++ L +
    KIAA0756   200    QEGAPLTLQCNpPPGLPSPVIFWMSssMEPITqdkrvsqgHNGDLYF 246  

                   knvsleDsGl.YtCvArNsvg<-*
                   +nv l D  ++Y+C Ar +     
    KIAA0756   247 SNVMLQDMQTdYSCNARFHFT    267  

SM00409: domain 3 of 6, from 317 to 398: score 57.6, E = 1.6e-12
                   *->pp.vtvkeGesvtLtC.as.....titWy..................
                       +++ v +G ++ L+C as+ +++ i Wy+++++ ++++ +  + ++
    KIAA0756   317    ASsQMVLRGMDLLLECiASgvptpDIAWYkkggdlpsdkakfenfnk 363  

                   .LtI.nvtpeDsesgGtYtCaat..sgsasseqgttLtVl<-*
                    L+I+nv++eDs   G+Y+C a+++ gs+    ++ ++V+   
    KIAA0756   364 aLRItNVSEEDS---GEYFCLASnkMGSIRH--TISVRVK    398  

SM00408: domain 3 of 6, from 323 to 387: score 74.0, E = 1.8e-17
                   *->leGqsVtLtCpasgdpvpnItWlk.gkplp........sgstLtikn
                      l G ++ L+C+asg p+p+I W+k+g  lp+++ + ++ ++ L+i+n
    KIAA0756   323    LRGMDLLLECIASGVPTPDIAWYKkGGDLPsdkakfenFNKALRITN 369  

                   vsleDsGlYtCvArNsvg<-*
                   vs+eDsG+Y C+A+N++g   
    KIAA0756   370 VSEEDSGEYFCLASNKMG    387  

SM00409: domain 4 of 6, from 407 to 490: score 32.6, E = 5.4e-05
                   *->pp.vtvkeGesvtLtC.as.....titWy..................
                      p+++   +Ge+ +L C+a++++++t++W+ ++ + ++ ++++++   
    KIAA0756   407    PKnLILAPGEDGRLVCrANgnpkpTVQWMvngeplqsappnpnreva 453  

                   ...LtI.nvtpeDsesgGtYtCaat..sgsasseqgttLtVl<-*
                   ++++++++ + +     ++Y+C  ++ +g   +  ++ ++Vl   
    KIAA0756   454 gdtIIFrDTQISSR---AVYQCNTSneHGYLLA--NAFVSVL    490  

SM00408: domain 4 of 6, from 413 to 479: score 44.0, E = 1.9e-08
                   *->leGqsVtLtCpasgdpvpnItWlk.gkplp..........sgstLti
                       +G++ +L C+a+g+p p+++W  +g+pl++ +++++++  g t  +
    KIAA0756   413    APGEDGRLVCRANGNPKPTVQWMVnGEPLQsappnpnrevAGDTIIF 459  

                   knvsleDsGlYtCvArNsvg<-*
                   ++ + + + +Y+C  +N++g   
    KIAA0756   460 RDTQISSRAVYQCNTSNEHG    479  

SM00409: domain 5 of 6, from 501 to 583: score 40.0, E = 3.3e-07
                   *->pp.vtvkeGesvtLtC.as.....titWy..................
                       + + v +  + +L C++ +++ +t++W++++++++ ++++ +   +
    KIAA0756   501    NQlIRVILYNRTRLDCpFFgspipTLRWFkngqgsnldggnyhvyen 547  

                   ..LtI.nvtpeDsesgGtYtCaat..sgsasseqgttLtVl<-*
                   ++L+I+ +++eD+   G+YtC+at+  g+a+    ++L+V+   
    KIAA0756   548 gsLEIkMIRKEDQ---GIYTCVATniLGKAEN--QVRLEVK    583  

SM00408: domain 5 of 6, from 507 to 572: score 50.2, E = 2.7e-10
                   *->leGqsVtLtCpasgdpvpnItWlk...gkplp.......sgstLtik
                      +  +  +L Cp  g+p p+ +W+k+++g+ l++++ +   +++L+ik
    KIAA0756   507    ILYNRTRLDCPFFGSPIPTLRWFKngqGSNLDggnyhvyENGSLEIK 553  

                   nvsleDsGlYtCvArNsvg<-*
                    +++eD G+YtCvA+N  g   
    KIAA0756   554 MIRKEDQGIYTCVATNILG    572  

SM00409: domain 6 of 6, from 592 to 674: score 54.1, E = 1.8e-11
                   *->pp.vtvkeGesvtLtC.as.......titWy................
                      p+++++++G +v+L+C+++++++ + t++W++++ +   +++ ++ +
    KIAA0756   592    PEdQVARRGTTVQLECrVKhdpslklTVSWLkddeplyignrmkked 638  

                   ..LtI.nvtpeDsesgGtYtCaat..sgsasseqgttLtVl<-*
                   ++LtI +v + D+   G YtC+a++   ++ +   ++LtVl   
    KIAA0756   639 dsLTIfGVAERDQ---GSYTCVASteLDQDLA--KAYLTVL    674  

SM00408: domain 6 of 6, from 598 to 663: score 35.0, E = 1e-05
                   *->leGqsVtLtCpasgdpvp....nItWlk.gkplp.......sgstLt
                      + G++V+L+C+   +++p+ + +++Wlk+++pl  +++ ++ + +Lt
    KIAA0756   598    RRGTTVQLECR--VKHDPslklTVSWLKdDEPLYignrmkkEDDSLT 642  

                   iknvsleDsGlYtCvArNsvg<-*
                   i  v++ D G YtCvA+ +     
    KIAA0756   643 IFGVAERDQGSYTCVASTELD    663  

SM00060: domain 1 of 4, from 677 to 760: score 51.8, E = 8.7e-11
                   *->PgpPsnptelrvtdvtststsdltsvtlsWepP......ivgYr...
                      P+ P++   l++td  ++      sv+l+W p + ++++i+ Y+++ 
    KIAA0756   677    PDRPRD---LELTDLAER------SVRLTWIPGdannspITDYVvqf 714  

                   ......................ytltgLkPgaepwteYefrVrAvngnda
                   ++++ +++++ + ++ ++++++++l+ L+P+     +Y+frV+A+n+  +
    KIAA0756   715 eedqfqpgvwhdhskypgsvnsAVLR-LSPY----VNYQFRVIAINE--V 757  

                   Geg<-*
                   G++   
    KIAA0756   758 GSS    760  

SM00060: domain 2 of 4, from 777 to 859: score 35.6, E = 6.8e-06
                   *->PgpPsnptelrvtdvtststsdltsvtlsWepP............iv
                       + P++   ++ + + ++       ++++W+p +  +  +++  +iv
    KIAA0756   777    ESNPGD---VKGEGTRKN------NMEITWTPMnatsafgpnlryIV 814  

                   gYr.................ytltgLkPgaepwteYefrVrAvngndaGe
                    +r++++++ ++++++++++y++     +      Ye+rV+A+n+   G 
    KIAA0756   815 KWRrretreawnnvtvwgsrYVVGQTPVY----VPYEIRVQAEND--FGK 858  

                   g<-*
                   g   
    KIAA0756   859 G    859  

SM00060: domain 3 of 4, from 875 to 966: score 28.9, E = 0.00072
                   *->PgpPsnptelrvtdvtststsdltsvtlsWepP............iv
                        +P+    ++v+  +st       ++l+W++ +++   +   +++ 
    KIAA0756   875    RAAPTE---VKVRVMNST------AISLQWNRVysdtvqgqlreyRA 912  

                   gYr..........................ytltgLkPgaepwteYefrVr
                   +Y+++++  ++ ++++++++ + ++++ + +++ L P+    ++Y+   +
    KIAA0756   913 YYWressllknlwvsqkrqqasfpgdrlrGVVSRLFPY----SNYKLEMV 958  

                   AvngndaGeg<-*
                   +vng  +G g   
    KIAA0756   959 VVNG--RGDG    966  

SM00060: domain 4 of 4, from 981 to 1065: score 36.7, E = 3.1e-06
                   *->PgpPsnptelrvtdvtststsdltsvtlsWepP......ivgYr...
                      P++P++   +rv+  +        +++l+W++P+++++  +gY+ + 
    KIAA0756   981    PSAPRR---FRVRQPNLE------TINLEWDHPehpngiMIGYTlky 1018 

                   ......................ytltgLkPgaepwteYefrVrAvngnda
                   +  ++++++++ +++ +++++++t+    P     ++Y+f+++A++   +
    KIAA0756  1019 vafngtkvgkqivenfspnqtkFTVQRTDPV----SRYRFTLSARTQ--V 1062 

                   Geg<-*
                   G+g   
    KIAA0756  1063 GSG    1065 

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