hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12201749/chunk_1/iprscan-20080502-12201749.nocrc
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Query sequence: KIAA0762
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00209                                                 316.9    1.4e-90   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00209    1/6     362   412 ..     1    66 []    42.7    5e-08
SM00209    2/6     421   472 ..     1    66 []    54.8  1.1e-11
SM00209    3/6     478   528 ..     1    66 []    60.6  2.1e-13
SM00209    4/6     534   583 ..     1    66 []    68.0  1.2e-15
SM00209    5/6     588   638 ..     1    66 []    54.5  1.3e-11
SM00209    6/6     674   723 ..     1    66 []    36.3  4.2e-06

Alignments of top-scoring domains:
SM00209: domain 1 of 6, from 362 to 412: score 42.7, E = 5e-08
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                       s Ws+WS+CS+ tC +G      r+R+R    + +           
    KIAA0762   362    YSNWSPWSACSSSTCDKG-----KRMRQR----MLKAQ-----LDLS 394  

                   epCs...EtrpCntqpnLqpCp<-*
                    pC+++++++pC+++     C+   
    KIAA0762   395 VPCPdtqDFQPCMGP----GCS    412  

SM00209: domain 2 of 6, from 421 to 472: score 54.8, E = 1.1e-11
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      +seW  WSpCS  +CG G     +r+R+R+    ++ +p+     +g
    KIAA0762   421    MSEWITWSPCS-ISCGMG-----MRSRERY----VKQFPE-----DG 452  

                   epCs....EtrpCntqpnLqpCp<-*
                   + C+ +++Et+ C+++   ++C+   
    KIAA0762   453 SVCTlpteETEKCTVN---EECS    472  

SM00209: domain 3 of 6, from 478 to 528: score 60.6, E = 2.1e-13
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      ++eW+eW +CS +tCG G     +++R+R    + +++p+     +g
    KIAA0762   478    MTEWGEWDECS-ATCGMG-----MKKRHR----MIKMNPA-----DG 509  

                   epCs....EtrpCntqpnLqpCp<-*
                   + C  ++++ + C+++    +C+   
    KIAA0762   510 SMCKaetsQAEKCMMP----ECH    528  

SM00209: domain 4 of 6, from 534 to 583: score 68.0, E = 1.2e-15
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                       s+WseWS+CS vtCG+G     +rtR+R    + +s          
    KIAA0762   534    LSPWSEWSDCS-VTCGKG-----MRTRQR----MLKS------LAEL 564  

                   epCs....EtrpCntqpnLqpCp<-*
                   ++C ++ ++++ C+++    +Cp   
    KIAA0762   565 GDCNedleQVEKCMLP----ECP    583  

SM00209: domain 5 of 6, from 588 to 638: score 54.5, E = 1.3e-11
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                       +eWs WS+C  ++CG+G     + +RtR    +  + p+    +gg
    KIAA0762   588    LTEWSQWSECN-KSCGKG-----HVIRTR----MIQMEPQ----FGG 620  

                   epCs...EtrpCntqpnLqpCp<-*
                   +pC+++ + + C  +    +C    
    KIAA0762   621 APCPetvQRKKCRIR----KCL    638  

SM00209: domain 6 of 6, from 674 to 723: score 36.3, E = 4.2e-06
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      + +W+ WS+C+ + CGgG     ++ R+ +   v +++ +++    +
    KIAA0762   674    MRPWTAWSECT-KLCGGG-----IQERYMT---VKKRFKSSQ----F 707  

                   epCs...EtrpCntqpnLqpCp<-*
                    +C +++E r+Cn++      p   
    KIAA0762   708 TSCKdkkEIRACNVH------P    723  

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