hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12220492/chunk_1/iprscan-20080502-12220492.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0763
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00222                                                 341.3    6.4e-98   1
SM00233                                                  25.5     0.0075   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00222     1/1     401   592 ..     1   226 []   341.3  6.4e-98
SM00233     1/1     633   744 ..     1    82 []    25.5   0.0075

Alignments of top-scoring domains:
SM00222: domain 1 of 1, from 401 to 592: score 341.3, E = 6.4e-98
                   *->sknrkkllsegikkfnqkPkkGiqfLqekgflakevDdspqevAkfl
                      ++ rk+++ +g ++fn+kP+kG+q+L+e+gf++    d+p  vA+fl
    KIAA0763   401    DVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVP----DTPVGVAHFL 443  

                   ydseSadadeseteglnkkaiGdyLgeshdefnrlvLhafvdlfdFsgkd
                              +++gl++++iG++Lg+++++fnr+vL++ vd++dFs+++
    KIAA0763   444 L----------QRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTME 483  

                   ldeALRefLesfrLPGEaQkIDRlleaFserYcecNpgvfskagkslski
                   ldeALR+f  ++r++GEaQk++Rl+eaFs+rYc cNpgv ++++      
    KIAA0763   484 LDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFR------ 527  

                   qqllnaDaaYvLaYSlIMLNTDLHnpnvkkskakdiLvKMtkedFikNlr
                       n+D++++La+++I+LNTD+++pnvk ++      KM++edFikNlr
    KIAA0763   528 ----NPDTIFILAFAIILLNTDMYSPNVKPER------KMKLEDFIKNLR 567  

                   ginkeiddgedlprefLeelYdsIknnei<-*
                   g++    dged+pre+L+++Y++I+++e+   
    KIAA0763   568 GVD----DGEDIPREMLMGIYERIRKREL    592  

SM00233: domain 1 of 1, from 633 to 744: score 25.5, E = 0.0075
                   *->vikeGwLlkks......k.swkkryfvLfngvLlyyksk........
                      +++   L    ++++++k + ++r  +Lfn+ L+ +k  ++++++ +
    KIAA0763   633    LVCYCRLFEVPdpnkpqKlGLHQREIFLFNDLLVVTKIFqkkknsvt 679  

                   .kpkgsipLsgcsvre.p......cFeivt.dr......tlllqAeseee
                    + + s++L g++v   ++   +++++++++  + + +  + + A+++++
    KIAA0763   680 ySFRQSFSLYGMQVLLfEnqyypnGIRLTSsVPgadikvLINFNAPNPQD 729  

                   reeWvealqsaiaka<-*
                   r++  + l++ ia+    
    KIAA0763   730 RKKFTDDLRESIAEV    744  

//