hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-12284603/chunk_1/iprscan-20080502-12284603.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0767 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00568 88.6 7.5e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00568 1/1 465 543 .. 1 80 [] 88.6 7.5e-22 Alignments of top-scoring domains: SM00568: domain 1 of 1, from 465 to 543: score 88.6, E = 7.5e-22 *->ekFrklFkLpeeEkLiadcekeVtysCyLsttg.....dipvqGrly ++F+++F+L e+E+ +a ce++ ++C+L++++++ ++d+ ++G+ly KIAA0767 465 GNFHEIFNLTENERPLAVCENG--WRCCLINRDrkmptDYIRNGVLY 509 iSnnrlcFrSnlfgkltppqyykvviPLadItrieKst<-* +++n+lcF S++ g++++ + vi+L+dIt+i+K++ KIAA0767 510 VTENYLCFESSKSGSSKR----NKVIKLVDITDIQKYK 543 //