hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12372838/chunk_1/iprscan-20080502-12372838.nocrc
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Query sequence: KIAA0772
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF01237.9.fs Oxysterol-binding protein                  318.7    9.5e-93   2
PF01237.9.ls Oxysterol-binding protein                  315.8      7e-92   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF01237.9.fs   1/2      24   299 ..     1   293 [.   278.5  1.2e-80
PF01237.9.ls   1/1      24   461 ..     1   440 []   315.8    7e-92
PF01237.9.fs   2/2     349   461 ..   327   440 .]    40.3  2.3e-11

Alignments of top-scoring domains:
PF01237.9.fs: domain 1 of 2, from 24 to 299: score 278.5, E = 1.2e-80
                   *->kSqhsSsssltsklkfilsep...kdltrRldipeeslspisLwsis
                       +  s+ + + + +   + e++ +k +t+ l +p +s+s  s w i+
    KIAA0772    24    DLDTSKNNRIGKTGERPSQENgiqKHRTS-LPAPMFSRSDFSVWTIL 69   

                   qlwvGkdLskitlPvfinEpkSmLqrvtedleYpelLdkAaaredsltrW
                   +++vG +Lskit+P  +nEp+S Lqr+te +e   l  +A  ++ +l+r 
    KIAA0772    70 KKCVGLELSKITMPIAFNEPLSFLQRITEYMEHVYLIHRASCQPQPLER- 118  

                   flyvaastlssysettrrvkKPlNPlLGEtFelkrendElpnkgqyrlls
                   + +vaa+ +s  ++   r+ KP+NPlLGEt el+re+    +   +r++s
    KIAA0772   119 MQSVAAFAVSAVASQWERTGKPFNPLLGETYELIRED---LG---FRFIS 162  

                   EQVSHHPPvsAffaespkskwrvqgevqikskFlGkslavmkeGltvhti
                   EQVSHHPP+sAf+ e ++ +  + g + +k kF+Gks ++ + G+ + + 
    KIAA0772   163 EQVSHHPPISAFHSEGLNHDFLFHGSIYPKLKFWGKSVEAEPRGT-ITLE 211  

                   ldikdingkpEtYtwtqPnttveGILvGkpfvElSGdesvinsstGdkcv
                   l  ++     E Ytwt P+  v+++++Gk+++E+ G + + n+ tG kcv
    KIAA0772   212 LLKHN-----EAYTWTNPTCCVHNVIIGKLWIEQYGTVEILNHRTGHKCV 256  

                   IeFktkGyfSGkkdsfkgrivkdpdgnkdKEkklytlsGkWndsmyikK<
                   ++Fk+ G f      ++g i  d  +     kkl+ + GkW++   +++ 
    KIAA0772   257 LHFKPCGLFGKELHKVEGHIQ-DKNK-----KKLFMIYGKWTECLWGID  299  

                   -*
                     
    KIAA0772     -    -    

PF01237.9.ls: domain 1 of 1, from 24 to 461: score 315.8, E = 7e-92
                   *->kSqhsSsssltsklkfilsep...kdltrRldipeeslspisLwsis
                       +  s+ + + + +   + e++ +k +t+ l +p +s+s  s w i+
    KIAA0772    24    DLDTSKNNRIGKTGERPSQENgiqKHRTS-LPAPMFSRSDFSVWTIL 69   

                   qlwvGkdLskitlPvfinEpkSmLqrvtedleYpelLdkAaaredsltrW
                   +++vG +Lskit+P  +nEp+S Lqr+te +e   l  +A  ++ +l+r 
    KIAA0772    70 KKCVGLELSKITMPIAFNEPLSFLQRITEYMEHVYLIHRASCQPQPLER- 118  

                   flyvaastlssysettrrvkKPlNPlLGEtFelkrendElpnkgqyrlls
                   + +vaa+ +s  ++   r+ KP+NPlLGEt el+re+    +   +r++s
    KIAA0772   119 MQSVAAFAVSAVASQWERTGKPFNPLLGETYELIRED---LG---FRFIS 162  

                   EQVSHHPPvsAffaespkskwrvqgevqikskFlGkslavmkeGltvhti
                   EQVSHHPP+sAf+ e ++ +  + g + +k kF+Gks ++ + G+ + + 
    KIAA0772   163 EQVSHHPPISAFHSEGLNHDFLFHGSIYPKLKFWGKSVEAEPRGT-ITLE 211  

                   ldikdingkpEtYtwtqPnttveGILvGkpfvElSGdesvinsstGdkcv
                   l  ++     E Ytwt P+  v+++++Gk+++E+ G + + n+ tG kcv
    KIAA0772   212 LLKHN-----EAYTWTNPTCCVHNVIIGKLWIEQYGTVEILNHRTGHKCV 256  

                   IeFktkGyfSGkkdsfkgrivkdpdgnkdKEkklytlsGkWndsmyikKv
                   ++Fk+ G f      ++g i  d  +     kkl+ + GkW++   +++ 
    KIAA0772   257 LHFKPCGLFGKELHKVEGHIQ-DKNK-----KKLFMIYGKWTECLWGIDP 300  

                   qsk...segelflDahktphe...........alkvrpLee..qhelesr
                    s ++ ++ e  +D  + + +++++++ +++ a  v++  e+ q  + s+
    KIAA0772   301 VSYesfKKQERRGDHLRKAKLdedsgkadsdvADDVPVAQEtvQVIPGSK 350  

                   kaWkkvada...lkvgnltvftktkneleerqRpllkptesrgvedqral
                   ++W  +++++++   +n+t+ft  +nele      l+pt+ r+++d+r +
    KIAA0772   351 LLWRINTRPpnsAQMYNFTSFTVSLNELETGMEKTLPPTDCRLRPDIRGM 400  

                   fkrledkedldkeekkekpeaddkerkqkgslyepkwfvpsgqpvtdKek
                   ++++ d +  +ke+ +ek++++ +er    ++ ++ wf p   p t    
    KIAA0772   401 ENGNMDLASQEKERLEEKQREARRERAKEEAEWQTRWFYPGNNPYT--GT 448  

                   lyikarkeyWefrKk<-*
                     + + + y    ++   
    KIAA0772   449 PDWLYAGDYF--ERN    461  

PF01237.9.fs: domain 2 of 2, from 349 to 461: score 40.3, E = 2.3e-11
                   *->srkaWkkvada...lkvgnltvftktkneleerqRpllkptesrgve
                      s+++W  +++++++   +n+t+ft  +nele      l+pt+ r+++
    KIAA0772   349    SKLLWRINTRPpnsAQMYNFTSFTVSLNELETGMEKTLPPTDCRLRP 395  

                   dqralfkrledkedldkeekkekpeaddkerkqkgslyepkwfvpsgqpv
                   d+r +++++ d +  +ke+ +ek++++ +er    ++ ++ wf p   p 
    KIAA0772   396 DIRGMENGNMDLASQEKERLEEKQREARRERAKEEAEWQTRWFYPGNNPY 445  

                   tdKeklyikarkeyWefrKk<-*
                   t      + + + y    ++   
    KIAA0772   446 T--GTPDWLYAGDYF--ERN    461  

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