hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12574513/chunk_1/iprscan-20080502-12574513.nocrc
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Query sequence: KIAA0784
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                  88.9    6.1e-22   8
SM00389                                                  36.3    4.2e-06   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/8      45    68 ..     1    23 []    14.3      7.7
SM00355      2/8      78   100 ..     1    23 []    10.5       21
SM00355      3/8     136   159 ..     1    23 []    11.7       15
SM00355      4/8     192   215 ..     1    23 []    11.4       16
SM00355      5/8     418   440 ..     1    23 []     4.4    1e+02
SM00355      6/8     460   481 ..     1    23 []     9.1       29
SM00355      7/8     483   506 ..     1    23 []    24.8    0.012
SM00355      8/8     593   618 ..     1    23 []     2.9  1.5e+02
SM00389      1/1     728   789 ..     1    63 []    36.3  4.2e-06

Alignments of top-scoring domains:
SM00355: domain 1 of 8, from 45 to 68: score 14.3, E = 7.7
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      + C+  C++s +  +a+k H r+vH   
    KIAA0784    45    FCCSA-CPFSSKFFsAYKSHFRnVH    68   

SM00355: domain 2 of 8, from 78 to 100: score 10.5, E = 21
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      + Cp+ C +   +k+ L+ H++  H   
    KIAA0784    78    LNCPY-CTFN-ADKkTLETHIKiFH    100  

SM00355: domain 3 of 8, from 136 to 159: score 11.7, E = 15
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y C++ C ++ + ++  ++H+++ H   
    KIAA0784   136    YYCKK-CTYRDPLYeIVRKHIYrEH    159  

SM00355: domain 4 of 8, from 192 to 215: score 11.4, E = 16
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                       +C+  C +  +s++aL++H+ + H   
    KIAA0784   192    IHCKR-CLFMPKSYeALVQHVIeDH    215  

SM00355: domain 5 of 8, from 418 to 440: score 4.4, E = 1e+02
                   *->ykCpigCgksfsskaLkrHmr.vH<-*
                        C+i C++ f+   +  H  + H   
    KIAA0784   418    KICTI-CNELFPENVYSVHFEkEH    440  

SM00355: domain 6 of 8, from 460 to 481: score 9.1, E = 29
                   *->ykCpigCgksfsskaLkrHmrvH<-*
                       kC + C++  ++  L +Hm +H   
    KIAA0784   460    SKCLY-CNRYLPTDTLLNHMLIH    481  

SM00355: domain 7 of 8, from 483 to 506: score 24.8, E = 0.012
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      + Cp+ C  +f++ + +  Hmr vH   
    KIAA0784   483    LSCPY-CRSTFNDVeKMAAHMRmVH    506  

SM00355: domain 8 of 8, from 593 to 618: score 2.9, E = 1.5e+02
                   *->ykCpigCg..ksfssk.aLkrHmr.vH<-*
                        Cp+ C +  + +  +aL +H+r++H   
    KIAA0784   593    TLCPL-CFsiLKGPISdALAHHLReRH    618  

SM00389: domain 1 of 1, from 728 to 789: score 36.3, E = 4.2e-06
                   *->krrkRtsftpeQleeLEkeFeknpYPsreereeLAkeLgLterqVkv
                      k     s  +   ++L k+F+k+pYP+r e+e+LA++L L ++ +  
    KIAA0784   728    KGHEDDS-YEARKSFLTKYFNKQPYPTRREIEKLAASLWLWKSDIAS 773  

                   WFQNRRakwkrqekkk<-*
                    F+N+R+k+ r  +k    
    KIAA0784   774 HFSNKRKKCVRDCEKY    789  

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