hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-13161837/chunk_1/iprscan-20080502-13161837.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0795 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF01344.15.ls Kelch motif 370.9 1.8e-108 6 PF01344.15.fs Kelch motif 358.9 7.8e-105 6 PF07707.5.ls BTB And C-terminal Kelch 191.1 2.4e-54 1 PF07707.5.fs BTB And C-terminal Kelch 189.2 9.5e-54 1 PF07646.5.ls Kelch motif 174.7 2.2e-49 6 PF07646.5.fs Kelch motif 163.4 5.2e-46 6 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF07707.5.fs 1/1 31 133 .. 1 103 [] 189.2 9.5e-54 PF07707.5.ls 1/1 31 133 .. 1 103 [] 191.1 2.4e-54 PF07646.5.ls 1/6 167 214 .. 1 54 [] 22.4 0.0015 PF07646.5.fs 1/6 167 214 .. 1 54 [] 20.5 0.0001 PF01344.15.ls 1/6 168 214 .. 1 45 [] 51.0 3.7e-12 PF01344.15.fs 1/6 168 214 .. 1 45 [] 49.0 4.3e-13 PF01344.15.fs 2/6 216 261 .. 1 45 [] 74.7 2.1e-20 PF01344.15.ls 2/6 216 261 .. 1 45 [] 76.7 6.7e-20 PF07646.5.fs 2/6 216 261 .. 1 54 [] 35.2 1e-08 PF07646.5.ls 2/6 216 261 .. 1 54 [] 37.1 5.6e-08 PF01344.15.fs 3/6 263 308 .. 1 45 [] 68.4 1.3e-18 PF07646.5.fs 3/6 263 308 .. 1 54 [] 38.4 1.4e-09 PF01344.15.ls 3/6 263 308 .. 1 45 [] 70.4 5.3e-18 PF07646.5.ls 3/6 263 308 .. 1 54 [] 40.3 6.2e-09 PF07646.5.fs 4/6 310 355 .. 1 54 [] 17.1 0.00088 PF01344.15.ls 4/6 310 355 .. 1 45 [] 53.6 5.9e-13 PF07646.5.ls 4/6 310 355 .. 1 54 [] 18.9 0.017 PF01344.15.fs 4/6 310 355 .. 1 45 [] 51.6 7.7e-14 PF01344.15.fs 5/6 357 402 .. 1 45 [] 48.3 6.9e-13 PF07646.5.ls 5/6 357 402 .. 1 54 [] 16.5 0.088 PF01344.15.ls 5/6 357 402 .. 1 45 [] 50.3 6.1e-12 PF01344.15.ls 6/6 404 449 .. 1 45 [] 68.9 1.5e-17 PF07646.5.ls 6/6 404 449 .. 1 54 [] 39.4 1.2e-08 PF07646.5.fs 6/6 404 449 .. 1 54 [] 37.5 2.4e-09 PF01344.15.fs 6/6 404 449 .. 1 45 [] 66.9 3.6e-18 Alignments of top-scoring domains: PF07707.5.fs: domain 1 of 1, from 31 to 133: score 189.2, E = 9.5e-54 *->CLgIrrfAdaygceeLaeaAdrfilqnFleVakseEFlqLskeqLie CLg+r+fA+++ c L++aA++fi+q+F+eV+ seEFl L++e+++e KIAA0795 31 CLGVRQFAETMMCAVLYDAANSFIHQHFVEVSMSEEFLALPLEDVLE 77 lLssDeLnVpsEeeVfeAvmrWvkhdvenRkkhlpeLLshVRLpLLspky l+s+DeLnV+sEe+VfeA+++Wv++d e+R ++lpeLLs++RLpL+ p++ KIAA0795 78 LVSRDELNVKSEEQVFEAALAWVRYDREQRGPYLPELLSNIRLPLCRPQF 127 Llevve<-* L ++v+ KIAA0795 128 LSDRVQ 133 PF07707.5.ls: domain 1 of 1, from 31 to 133: score 191.1, E = 2.4e-54 *->CLgIrrfAdaygceeLaeaAdrfilqnFleVakseEFlqLskeqLie CLg+r+fA+++ c L++aA++fi+q+F+eV+ seEFl L++e+++e KIAA0795 31 CLGVRQFAETMMCAVLYDAANSFIHQHFVEVSMSEEFLALPLEDVLE 77 lLssDeLnVpsEeeVfeAvmrWvkhdvenRkkhlpeLLshVRLpLLspky l+s+DeLnV+sEe+VfeA+++Wv++d e+R ++lpeLLs++RLpL+ p++ KIAA0795 78 LVSRDELNVKSEEQVFEAALAWVRYDREQRGPYLPELLSNIRLPLCRPQF 127 Llevve<-* L ++v+ KIAA0795 128 LSDRVQ 133 PF07646.5.ls: domain 1 of 6, from 167 to 214: score 22.4, E = 0.0015 *->pryphasv.vpggklyvvGGsfkgnrgtgngdesssdllvldpetnv +r + +++++ g +y vGG ++s++++ v+dp n+ KIAA0795 167 FRTRPRCCtSIAGLIYAVGGL-------NSAGDSLNVVEVFDPIANC 206 Weklpalp<-* We++ ++ KIAA0795 207 WERCRPMT 214 PF07646.5.fs: domain 1 of 6, from 167 to 214: score 20.5, E = 0.0001 *->pryphasv.vpggklyvvGGsfkgnrgtgngdesssdllvldpetnv +r + +++++ g +y vGG ++s++++ v+dp n+ KIAA0795 167 FRTRPRCCtSIAGLIYAVGGL-------NSAGDSLNVVEVFDPIANC 206 Weklpalp<-* We++ ++ KIAA0795 207 WERCRPMT 214 PF01344.15.ls: domain 1 of 6, from 168 to 214: score 51.0, E = 3.7e-12 *->pRsgagvvvldgkiYviGGydg..qslnsvevYDpetntWtklpsmp + + +++++ g+iY++GG ++ + sln vev+Dp n+W+++ +m+ KIAA0795 168 RTRPRCCTSIAGLIYAVGGLNSagDSLNVVEVFDPIANCWERCRPMT 214 <-* KIAA0795 - - PF01344.15.fs: domain 1 of 6, from 168 to 214: score 49.0, E = 4.3e-13 *->pRsgagvvvldgkiYviGGydg..qslnsvevYDpetntWtklpsmp + + +++++ g+iY++GG ++ + sln vev+Dp n+W+++ +m+ KIAA0795 168 RTRPRCCTSIAGLIYAVGGLNSagDSLNVVEVFDPIANCWERCRPMT 214 <-* KIAA0795 - - PF01344.15.fs: domain 2 of 6, from 216 to 261: score 74.7, E = 2.1e-20 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +Rs++gv+v++g++Y+iGGydg+ +l++ve+Y+pet+tWt++ sm+ KIAA0795 216 ARSRVGVAVVNGLLYAIGGYDGqLRLSTVEAYNPETDTWTRVGSMN 261 -* KIAA0795 - - PF01344.15.ls: domain 2 of 6, from 216 to 261: score 76.7, E = 6.7e-20 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +Rs++gv+v++g++Y+iGGydg+ +l++ve+Y+pet+tWt++ sm+ KIAA0795 216 ARSRVGVAVVNGLLYAIGGYDGqLRLSTVEAYNPETDTWTRVGSMN 261 -* KIAA0795 - - PF07646.5.fs: domain 2 of 6, from 216 to 261: score 35.2, E = 1e-08 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW r+++ ++v++g ly +GG+ +g +++s++ ++pet +W KIAA0795 216 ARSRVGVAVVNGLLYAIGGY--------DGQLRLSTVEAYNPETDTW 254 eklpalp<-* +++ ++ KIAA0795 255 TRVGSMN 261 PF07646.5.ls: domain 2 of 6, from 216 to 261: score 37.1, E = 5.6e-08 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW r+++ ++v++g ly +GG+ +g +++s++ ++pet +W KIAA0795 216 ARSRVGVAVVNGLLYAIGGY--------DGQLRLSTVEAYNPETDTW 254 eklpalp<-* +++ ++ KIAA0795 255 TRVGSMN 261 PF01344.15.fs: domain 3 of 6, from 263 to 308: score 68.4, E = 1.3e-18 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +Rs +g vvldg+iYv+GGydg++sl+sve Y+pet++Wt ++sm+ KIAA0795 263 KRSAMGTVVLDGQIYVCGGYDGnSSLSSVETYSPETDKWTVVTSMS 308 -* KIAA0795 - - PF07646.5.fs: domain 3 of 6, from 263 to 308: score 38.4, E = 1.4e-09 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW r+ + +vv++g++yv+GG+ +g++s+s++ + pet +W KIAA0795 263 KRSAMGTVVLDGQIYVCGGY--------DGNSSLSSVETYSPETDKW 301 eklpalp<-* + ++++ KIAA0795 302 TVVTSMS 308 PF01344.15.ls: domain 3 of 6, from 263 to 308: score 70.4, E = 5.3e-18 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +Rs +g vvldg+iYv+GGydg++sl+sve Y+pet++Wt ++sm+ KIAA0795 263 KRSAMGTVVLDGQIYVCGGYDGnSSLSSVETYSPETDKWTVVTSMS 308 -* KIAA0795 - - PF07646.5.ls: domain 3 of 6, from 263 to 308: score 40.3, E = 6.2e-09 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW r+ + +vv++g++yv+GG+ +g++s+s++ + pet +W KIAA0795 263 KRSAMGTVVLDGQIYVCGGY--------DGNSSLSSVETYSPETDKW 301 eklpalp<-* + ++++ KIAA0795 302 TVVTSMS 308 PF07646.5.fs: domain 4 of 6, from 310 to 355: score 17.1, E = 0.00088 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW +r+ ++v +g++yv+GG+ +g +s++ ++ t +W KIAA0795 310 NRSAAGVTVFEGRIYVSGGH--------DGLQIFSSVEHYNHHTATW 348 eklpalp<-* ++ +++ KIAA0795 349 HPAAGML 355 PF01344.15.ls: domain 4 of 6, from 310 to 355: score 53.6, E = 5.9e-13 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< Rs agv+v++g+iYv GG+dg q+++sve Y++ t tW++ + m KIAA0795 310 NRSAAGVTVFEGRIYVSGGHDGlQIFSSVEHYNHHTATWHPAAGML 355 -* KIAA0795 - - PF07646.5.ls: domain 4 of 6, from 310 to 355: score 18.9, E = 0.017 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW +r+ ++v +g++yv+GG+ +g +s++ ++ t +W KIAA0795 310 NRSAAGVTVFEGRIYVSGGH--------DGLQIFSSVEHYNHHTATW 348 eklpalp<-* ++ +++ KIAA0795 349 HPAAGML 355 PF01344.15.fs: domain 4 of 6, from 310 to 355: score 51.6, E = 7.7e-14 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< Rs agv+v++g+iYv GG+dg q+++sve Y++ t tW++ + m KIAA0795 310 NRSAAGVTVFEGRIYVSGGHDGlQIFSSVEHYNHHTATWHPAAGML 355 -* KIAA0795 - - PF01344.15.fs: domain 5 of 6, from 357 to 402: score 48.3, E = 6.9e-13 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +R+++g+++l+ k++v+GGydg+ +l+ +e+Y+ + ++W+ + +m KIAA0795 357 KRCRHGAASLGSKMFVCGGYDGsGFLSIAEMYSSVADQWCLIVPMH 402 -* KIAA0795 - - PF07646.5.ls: domain 5 of 6, from 357 to 402: score 16.5, E = 0.088 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW r++h ++++g+k++v+GG+ +g+ ++s + +W KIAA0795 357 KRCRHGAASLGSKMFVCGGY--------DGSGFLSIAEMYSSVADQW 395 eklpalp<-* + + +++ KIAA0795 396 CLIVPMH 402 PF01344.15.ls: domain 5 of 6, from 357 to 402: score 50.3, E = 6.1e-12 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +R+++g+++l+ k++v+GGydg+ +l+ +e+Y+ + ++W+ + +m KIAA0795 357 KRCRHGAASLGSKMFVCGGYDGsGFLSIAEMYSSVADQWCLIVPMH 402 -* KIAA0795 - - PF01344.15.ls: domain 6 of 6, from 404 to 449: score 68.9, E = 1.5e-17 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +Rs+++ v+ g++Y++GGydg++ l+sve+YDpet++Wt++++m KIAA0795 404 RRSRVSLVASCGRLYAVGGYDGqSNLSSVEMYDPETDCWTFMAPMA 449 -* KIAA0795 - - PF07646.5.ls: domain 6 of 6, from 404 to 449: score 39.4, E = 1.2e-08 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW +r+++++v ++g+ly vGG+ +g + +s++ +dpet +W KIAA0795 404 RRSRVSLVASCGRLYAVGGY--------DGQSNLSSVEMYDPETDCW 442 eklpalp<-* + ++++ KIAA0795 443 TFMAPMA 449 PF07646.5.fs: domain 6 of 6, from 404 to 449: score 37.5, E = 2.4e-09 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW +r+++++v ++g+ly vGG+ +g + +s++ +dpet +W KIAA0795 404 RRSRVSLVASCGRLYAVGGY--------DGQSNLSSVEMYDPETDCW 442 eklpalp<-* + ++++ KIAA0795 443 TFMAPMA 449 PF01344.15.fs: domain 6 of 6, from 404 to 449: score 66.9, E = 3.6e-18 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +Rs+++ v+ g++Y++GGydg++ l+sve+YDpet++Wt++++m KIAA0795 404 RRSRVSLVASCGRLYAVGGYDGqSNLSSVEMYDPETDCWTFMAPMA 449 -* KIAA0795 - 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